Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02468 ATGACCATGTCCCTCGAAGACTCTCTAAGATCTCTATCGCTGGATTACCTTAATCTGCTCATCAATGGCCAAGCCTTCAGCGACGTCACCTTCAGCGTGGAGGGTCGTCTCGTCCACGCTCACCGCTGCATCCTCGCTGCTCGAAGCCTCTTCTTCAGGAAATTCTTCTGTGGACCAGACCCACCTTCTGGGCTCGACCCGGCCGGGACACGAGTCAACTCGGCCACGTCTACGTCGAGGTCTGGGGTCATACCTGTTAATTCGGTGGGTTATGAGGTCTTCTTGTTGCTTCTCCAGTTCTTGTACAGTGGCCAAGTCTCTATTGTTCCTCAGAAGCACGAGCCCAGGCCTAATTGTGGAGAGAGAGGTTGTTGGCACACGCATTGCACCTCAGCCGTCGATCTTGCTCTTGAAACTCTCGCTGGCGCTAGATACTTTGGTGTTGAGCAGCTCGCATTGCTTACCCAGAAACAATTGGCTAGCATGGTAGAGAAGGCCTCGATTGAAGATGTAATGAAAGTGCTTCTAGCTTCAAGAAAGCAAGACATGCACCAGCTTTGGTCCACTTGTTCCCATCTTGTTGCAAAGTCAGGTCTCCCCCCCGAAGTCCTCGCTAAGCACCTTCCCATTGACGTTGTAGCCAAGATAGAGGAGCTTCGTCTCAAATCCTCCCTCGCTCGCCGTTCCCTTTTGCCACATCAtcatcaccaccaccaccatgaTCTCGGAGCCGCCGCCGACCTCGATGACCAGAAAATCCGGCGGATGAGACGAGCACTTGATTCCTCCGACGTAGAACTAGTCAAGCTCATGGTAATGGGAGAAGGCCTTAATCTAGATGAAGCATTGGCACTACATTATGCCGTAGAGAATTGTAGCCGTGAAGTAGTGAAAGCTTTGCTAGAACTGGGTGCAGCCGATGTTAACTACCCAGCAGGACCAGCTGGGAAAACGCCGCTTCATCTTGCTGCCGAAATGGTGTCTCCGGACATGGTGGCGGTGCTGCTCGACCACCACGCCGATCCCAATGTCCGTACGGTTGATGGGGTGACCCCACTAGACATCCTCAGAACCCTAACCTCGGATTTCCTCTTCAAGGGTGCTGTCCCTGGTCTCACGCACATTGAACCAAACAAGCTGAGGCTGTGTTTGGAACTTGTTCAATCGGCAGCACTTGTGCTTTCACGAGAAGAAGGCAATGCCAATCCTCCTTCTTCCACGCCCATATACCCTCCAATGAGTGAAGACCATAGCAGCagtagcagcagcagcaacattGCAAACCTTAACCTCGATTCTAGGTTGGTTTATCTGAACCTGGGTGCCACCCAGTTGGGTGCCGGAGGAGACGACGATAACAACCAGAATAGCCAGAGGGATGCCATGAACCGTCATGGATCGCATCCGCAAGCGGGTTGTGACCCAACAATGTACCACCACTCTCATGACTTCTA 1454 0.511 MVEKASIEDVMKVLLASRKQDMHQLWSTCSHLVAKSGLPPEVLAKHLPIDVVAKIEELRLKSSLARRSLLPHHHHHHHHDLGAAADLDDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHLAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNANPPSSTPIYPPMSEDHSSSSSSSNIANLNLDSRLVYLNLGATQLGAGGDDDNNQNSQRDAMNRHGSHPQAGCDPTMYHHSHDF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02468 323 Gene3D - 83 202 IPR036770 -
Bva13g02468 323 Pfam Domain of unknown function (DUF3420) 37 96 IPR024228 -
Bva13g02468 323 MobiDBLite consensus disorder prediction 250 264 - -
Bva13g02468 323 Pfam Ankyrin repeats (3 copies) 102 184 IPR002110 GO:0005515
Bva13g02468 323 SUPERFAMILY Ankyrin repeat 113 197 IPR036770 -
Bva13g02468 323 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 323 IPR044284 GO:0099402
Bva13g02468 323 MobiDBLite consensus disorder prediction 284 323 - -
Bva13g02468 323 ProSiteProfiles Ankyrin repeat region circular profile. 154 184 - -
Bva13g02468 323 ProSiteProfiles Ankyrin repeat profile. 154 186 IPR002110 GO:0005515
Bva13g02468 323 MobiDBLite consensus disorder prediction 287 303 - -
Bva13g02468 323 PANTHER REGULATORY PROTEIN NPR5 1 323 - -
Bva13g02468 323 SMART ANK_2a 154 183 IPR002110 GO:0005515
Bva13g02468 323 SMART ANK_2a 119 149 IPR002110 GO:0005515
Bva13g02468 323 MobiDBLite consensus disorder prediction 236 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02468 Bva-Chr13 18592098 18595455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02468 89 195 C2H2 Transcription Factor Family AT5G12850 32.479 7.78e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02468 K14508 - zju:107433767 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02468 13 18592098 18595455 Bva13g02468 13 18592098 18595455 ECH