Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02445 ATGGCAAAGTGGAAGCGTTGGTTTGGATGGACGAAAAGGCTCCTCACTTCTGAGCCgaaggaaaaaAAGCCAAAGAAATGGAGGAGTTGGAGCCTTGGATGGTTTAAGCTGAGACATTGCCCCGCACTTACAGCACCAAATAGAACACTCACCGAAGCAAAAGCAGAACAGAGAAAGCATGCTTTGAGTGTCGCCATTGCAACAGCAGCTGCTGCAGAGGCTGCGGTTGCTGCTGCCCAAGCTGCTGCAGAGGTTGTGAAGCTCACGGGTGCTTCTGGTTCTTATAATTATCCGTCTAATGGAGACAGAAACATTGCTGCCATAAAGATTCAAAGTGTATATCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGGGTTGTGAGACTTCAAGCTATAATTCGTGGCCAAGTCGTGAGACGCACTTTGAAGCATTTGCCTTCCAATGCAAGAAAGCAGGTGGAAATTCAGGAAAGAAGCGGTTATACTGCAGATGGAAGCTGCAAACGTGACAAGATGAAGCAGTGTGCAAAGCAAAAGGAGAAGTtggaagagaaggaaatgaagCCTGAATGCCATAGTCAAAGAACTTGGGATTGCAGCTTTCTCTCAAAAGAAGACATTGAAGCCATATGGTTGAAGAAGCAAGAGGCCCATGTCAAAAGAGAGCGCATGAAGCAATACTCATTCTCGCACCGGGAGAGAATAATTGCCCACATGATAGAAGAACCTGTTTCCATTAAGGAATTTGGTAGAGATAGCTGCCACACTTTACAAGAATGGCTGGATAAAGAAATACGTACCCGGAATGTGTTTCACAAACCAGCTCTTCCTTCAAACCTTATTACTAGGGAAGTGTACGGTACAGCACAAATTGCACAGAAGAAtgtaaaaagagaagattCACAAGTGGAAGAATTGAATTCACAAACTTCACTCCCAAGGAAATCATTTTCTCACATAAAGAGAAGTTCAGTTGGAGATGAGAGATCAATGCCCAATTCTCCAGTTTTTCCCAGCTACATGGCTGTGACAGAATCTGCCAAAGTAAAGGCAAGGTCTATGAGCACACCAAGGCAAAGAACAGGATTTATGGATGTATTTTCTGATCAGAGTGGGACTCAACAGGAGGGTATATCTTTCTGGTCTTATTATGATGCGACTACCAGCACCAATGGAAAGAGTGAAGGTTTTCAGCAAAGATGTCATAGTACAAATTGCCGTTATTATCACTA 1241 0.4247 MAKWKRWFGWTKRLLTSEPKEKKPKKWRSWSLGWFKLRHCPALTAPNRTLTEAKAEQRKHALSVAIATAAAAEAAVAAAQAAAEVVKLTGASGSYNYPSNGDRNIAAIKIQSVYRAHLARKALRALKGVVRLQAIIRGQVVRRTLKHLPSNARKQVEIQERSGYTADGSCKRDKMKQCAKQKEKLEEKEMKPECHSQRTWDCSFLSKEDIEAIWLKKQEAHVKRERMKQYSFSHRERIIAHMIEEPVSIKEFGRDSCHTLQEWLDKEIRTRNVFHKPALPSNLITREVYGTAQIAQKNVKREDSQVEELNSQTSLPRKSFSHIKRSSVGDERSMPNSPVFPSYMAVTESAKVKARSMSTPRQRTGFMDVFSDQSGTQQEGISFWSYYDATTSTNGKSEGFQQRCHSTNCRYYH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02445 413 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Bva13g02445 413 Gene3D - 102 154 - -
Bva13g02445 413 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Bva13g02445 413 Pfam IQ calmodulin-binding motif 127 146 IPR000048 GO:0005515
Bva13g02445 413 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
Bva13g02445 413 MobiDBLite consensus disorder prediction 303 340 - -
Bva13g02445 413 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Bva13g02445 413 Coils Coil 171 191 - -
Bva13g02445 413 Coils Coil 292 312 - -
Bva13g02445 413 Pfam Protein of unknown function (DUF4005) 329 366 IPR025064 -
Bva13g02445 413 SMART iq_5 125 146 IPR000048 GO:0005515
Bva13g02445 413 SMART iq_5 102 124 IPR000048 GO:0005515
Bva13g02445 413 PANTHER IQ-DOMAIN 12 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02445 Bva-Chr13 18467057 18469711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02445 1 409 IQD Protein Family AT5G03960 41.981 5.35e-68 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02445 13 18467057 18469711 Bva13g02445 13 18467057 18469711 ECH