Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02417 atgaaagagaagaaagtgtGTGTGGTGTGGGAAGATCTAACAGTGAAGGTGCCTACTTCATTAGGAGCTGCTGCAACTGCAGATGACCCAAAAAGCAGGAAATTGCTTGATGGGATCACTGGTTTTGCTGAGCCTGGTAGGATTATGGCCCTCATGGGTCCTTCTGGCTCTGGCAAAACCACTCTCCTCGATTCACTTGCTGGAAGAATACCAGCAAATGTTACAATAACAGGCGACATTTTAATCAACGGGAGCAAGAGAAATTTGTATTGTACAGAAGTGTCTTACGTGGCTCAAGAAGAACTTTTCTTGGGAACTCTAACGGTAAGGGAAACTCTGACATACTCTGCAAACATGAGGCTTCCTTCCAAAATGAGCAAAGAAGAGATAAGAAAGGTAGTAGAGGAAACAATAATGGAAATGGGTCTCGAAGATTGTGCTGATAACAAGATAGGGAATTGGCATTTACGGGGTATTAGCAATGGTGAAAAGAAGAGACTCAGCGTTGGTCTTGAGATTTTGACACAACCCAGTATCTTACTTCTTGATGAACCAACTAGTGGACTTGACAGTGCCTCAGCTTTCTATGTGATTCAAGCACTAACCAAGATTGCTCATGATGGCAAAATAGTAGTATGCTCCGTTCACCAGCCCAGTGGTGAAACCTTTGATCTCTTTGATGATCTTCTCCTGCTCTCAAGCGGAGAGACTGTTTATTTTGGAGCAGCAAAAAAGGCTTTAAAGTTTTTTACAGATGCAGGGTTTCCCTGTCCAACTACAAGAAACCCTTCTGATCATTTCCTACTATGCATTAATCTCGACTTCGACTCGATTACTACAACTCTAATAAGATCCCAAATATGTCTGTCATCACAATCAAATACTGCATGGGACAAGACAACAGCACAGATTAGAGCAACACTTATTGAGAATTACAAAAGTTCTGAGCTAATGATCATGGCAAGAGAAAGAATTGAGAAACTTAAACTCAATGAAGCACAAGTAACAGAGTCCAGCATAAGCAGAAGAACTAACTGGTGGAGGCAACTATTCACTTTGAGTAAAAGATCCTTCCTTAACATGACTAGGGACATTGGCTACTACTGGTTAAGGATCATATTCTATATACTGGTATCAATCACTGTTGGACTACcatttttcattgaagaaTTAAAGGTGTTCTACGGTGAAAAGTCCAAAGGACATTATGGAGAGGCTGTATTTGTAATATCAAACTTTGTATCATCATTCCCTTTCCTGGTTGTTATATCATTCTTCTCCGgcacaattatatatttcatggTGCAATTTCATCCAGGCTTAagtaattatgtatttttctgCATCAACCTATTGTGCTGCCTATCTGTTATTGAGGCCTGCGCCTTGGTTGTAGCCTCAGTGGTGCCAAATGTTCTGATGGGCATTGGAACAGCAACTGGTGTAATAATTTTCATGATGATGTCCTCCCAAATCTTCAGACCACTCCCTGATCTTCCCAAGTTCTTTTGGCGCTACCCCATGTCCTATCTCAGTTTTGCTACTTGGGCAGTGCAGGGGCAGTACAAGAATGACATGCTGGGGCTTGAATTTGATCCGCTGGTACCTGGCTACCCAAAAGTCAAGGGAGAACAAGTGTTAGAATTGGTATTTGGGGTTCCATTAAATCATGCCAAGTGGTGGGACTTAACAGCATTGGTTACATTATTATTGGTTCACCGGTTGCTTTTTTACTTAGTATTAATGTATAAGAGTAGGTCAAAATCAACCATGCTGGGGTTTTGTGCTAAGCTATCTATGCATAACTTTGCTCAAAGATTGTTGCCAAGTAAGAAGACATCAATCTCTTCAAAGAAACATCGACCTCCCAATTCATTATCTTCTCAAGAGGGTTTTATGTCTCCAAATTTGGCAATGTA 1919 0.3976 MKEKKVCVVWEDLTVKVPTSLGAAATADDPKSRKLLDGITGFAEPGRIMALMGPSGSGKTTLLDSLAGRIPANVTITGDILINGSKRNLYCTEVSYVAQEELFLGTLTVRETLTYSANMRLPSKMSKEEIRKVVEETIMEMGLEDCADNKIGNWHLRGISNGEKKRLSVGLEILTQPSILLLDEPTSGLDSASAFYVIQALTKIAHDGKIVVCSVHQPSGETFDLFDDLLLLSSGETVYFGAAKKALKFFTDAGFPCPTTRNPSDHFLLCINLDFDSITTTLIRSQICLSSQSNTAWDKTTAQIRATLIENYKSSELMIMARERIEKLKLNEAQVTESSISRRTNWWRQLFTLSKRSFLNMTRDIGYYWLRIIFYILVSITVGLPFFIEELKVFYGEKSKGHYGEAVFVISNFVSSFPFLVVISFFSGTIIYFMVQFHPGLSNYVFFCINLLCCLSVIEACALVVASVVPNVLMGIGTATGVIIFMMMSSQIFRPLPDLPKFFWRYPMSYLSFATWAVQGQYKNDMLGLEFDPLVPGYPKVKGEQVLELVFGVPLNHAKWWDLTALVTLLLVHRLLFYLVLMYKSRSKSTMLGFCAKLSMHNFAQRLLPSKKTSISSKKHRPPNSLSSQEGFMSPNLAM 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02417 639 Gene3D - 1 253 IPR027417 -
Bva13g02417 639 Pfam ABC-2 type transporter 216 269 IPR043926 GO:0140359
Bva13g02417 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 251 IPR027417 -
Bva13g02417 639 Pfam ABC-2 type transporter 373 520 IPR013525 GO:0016020|GO:0140359
Bva13g02417 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 383 605 - -
Bva13g02417 639 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 383 605 - -
Bva13g02417 639 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 7 383 - -
Bva13g02417 639 SMART AAA_5 45 244 IPR003593 -
Bva13g02417 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 7 383 - -
Bva13g02417 639 MobiDBLite consensus disorder prediction 619 639 - -
Bva13g02417 639 MobiDBLite consensus disorder prediction 612 639 - -
Bva13g02417 639 Pfam ABC transporter 38 187 IPR003439 GO:0005524
Bva13g02417 639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 8 259 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02417 Bva-Chr13 18301067 18304171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02417 43 219 Calmodulin-binding Proteins AT2G36910 29.032 4.57e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02417 K05681 - gmx:100802207 872.463