Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva13g02417 | atgaaagagaagaaagtgtGTGTGGTGTGGGAAGATCTAACAGTGAAGGTGCCTACTTCATTAGGAGCTGCTGCAACTGCAGATGACCCAAAAAGCAGGAAATTGCTTGATGGGATCACTGGTTTTGCTGAGCCTGGTAGGATTATGGCCCTCATGGGTCCTTCTGGCTCTGGCAAAACCACTCTCCTCGATTCACTTGCTGGAAGAATACCAGCAAATGTTACAATAACAGGCGACATTTTAATCAACGGGAGCAAGAGAAATTTGTATTGTACAGAAGTGTCTTACGTGGCTCAAGAAGAACTTTTCTTGGGAACTCTAACGGTAAGGGAAACTCTGACATACTCTGCAAACATGAGGCTTCCTTCCAAAATGAGCAAAGAAGAGATAAGAAAGGTAGTAGAGGAAACAATAATGGAAATGGGTCTCGAAGATTGTGCTGATAACAAGATAGGGAATTGGCATTTACGGGGTATTAGCAATGGTGAAAAGAAGAGACTCAGCGTTGGTCTTGAGATTTTGACACAACCCAGTATCTTACTTCTTGATGAACCAACTAGTGGACTTGACAGTGCCTCAGCTTTCTATGTGATTCAAGCACTAACCAAGATTGCTCATGATGGCAAAATAGTAGTATGCTCCGTTCACCAGCCCAGTGGTGAAACCTTTGATCTCTTTGATGATCTTCTCCTGCTCTCAAGCGGAGAGACTGTTTATTTTGGAGCAGCAAAAAAGGCTTTAAAGTTTTTTACAGATGCAGGGTTTCCCTGTCCAACTACAAGAAACCCTTCTGATCATTTCCTACTATGCATTAATCTCGACTTCGACTCGATTACTACAACTCTAATAAGATCCCAAATATGTCTGTCATCACAATCAAATACTGCATGGGACAAGACAACAGCACAGATTAGAGCAACACTTATTGAGAATTACAAAAGTTCTGAGCTAATGATCATGGCAAGAGAAAGAATTGAGAAACTTAAACTCAATGAAGCACAAGTAACAGAGTCCAGCATAAGCAGAAGAACTAACTGGTGGAGGCAACTATTCACTTTGAGTAAAAGATCCTTCCTTAACATGACTAGGGACATTGGCTACTACTGGTTAAGGATCATATTCTATATACTGGTATCAATCACTGTTGGACTACcatttttcattgaagaaTTAAAGGTGTTCTACGGTGAAAAGTCCAAAGGACATTATGGAGAGGCTGTATTTGTAATATCAAACTTTGTATCATCATTCCCTTTCCTGGTTGTTATATCATTCTTCTCCGgcacaattatatatttcatggTGCAATTTCATCCAGGCTTAagtaattatgtatttttctgCATCAACCTATTGTGCTGCCTATCTGTTATTGAGGCCTGCGCCTTGGTTGTAGCCTCAGTGGTGCCAAATGTTCTGATGGGCATTGGAACAGCAACTGGTGTAATAATTTTCATGATGATGTCCTCCCAAATCTTCAGACCACTCCCTGATCTTCCCAAGTTCTTTTGGCGCTACCCCATGTCCTATCTCAGTTTTGCTACTTGGGCAGTGCAGGGGCAGTACAAGAATGACATGCTGGGGCTTGAATTTGATCCGCTGGTACCTGGCTACCCAAAAGTCAAGGGAGAACAAGTGTTAGAATTGGTATTTGGGGTTCCATTAAATCATGCCAAGTGGTGGGACTTAACAGCATTGGTTACATTATTATTGGTTCACCGGTTGCTTTTTTACTTAGTATTAATGTATAAGAGTAGGTCAAAATCAACCATGCTGGGGTTTTGTGCTAAGCTATCTATGCATAACTTTGCTCAAAGATTGTTGCCAAGTAAGAAGACATCAATCTCTTCAAAGAAACATCGACCTCCCAATTCATTATCTTCTCAAGAGGGTTTTATGTCTCCAAATTTGGCAATGTA | 1919 | 0.3976 | MKEKKVCVVWEDLTVKVPTSLGAAATADDPKSRKLLDGITGFAEPGRIMALMGPSGSGKTTLLDSLAGRIPANVTITGDILINGSKRNLYCTEVSYVAQEELFLGTLTVRETLTYSANMRLPSKMSKEEIRKVVEETIMEMGLEDCADNKIGNWHLRGISNGEKKRLSVGLEILTQPSILLLDEPTSGLDSASAFYVIQALTKIAHDGKIVVCSVHQPSGETFDLFDDLLLLSSGETVYFGAAKKALKFFTDAGFPCPTTRNPSDHFLLCINLDFDSITTTLIRSQICLSSQSNTAWDKTTAQIRATLIENYKSSELMIMARERIEKLKLNEAQVTESSISRRTNWWRQLFTLSKRSFLNMTRDIGYYWLRIIFYILVSITVGLPFFIEELKVFYGEKSKGHYGEAVFVISNFVSSFPFLVVISFFSGTIIYFMVQFHPGLSNYVFFCINLLCCLSVIEACALVVASVVPNVLMGIGTATGVIIFMMMSSQIFRPLPDLPKFFWRYPMSYLSFATWAVQGQYKNDMLGLEFDPLVPGYPKVKGEQVLELVFGVPLNHAKWWDLTALVTLLLVHRLLFYLVLMYKSRSKSTMLGFCAKLSMHNFAQRLLPSKKTSISSKKHRPPNSLSSQEGFMSPNLAM | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva13g02417 | 639 | Gene3D | - | 1 | 253 | IPR027417 | - | |
Bva13g02417 | 639 | Pfam | ABC-2 type transporter | 216 | 269 | IPR043926 | GO:0140359 | |
Bva13g02417 | 639 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 32 | 251 | IPR027417 | - | |
Bva13g02417 | 639 | Pfam | ABC-2 type transporter | 373 | 520 | IPR013525 | GO:0016020|GO:0140359 | |
Bva13g02417 | 639 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 11 | 383 | 605 | - | - | |
Bva13g02417 | 639 | PANTHER | CASSETTE TRANSPORTER, PUTATIVE-RELATED | 383 | 605 | - | - | |
Bva13g02417 | 639 | PANTHER | CASSETTE TRANSPORTER, PUTATIVE-RELATED | 7 | 383 | - | - | |
Bva13g02417 | 639 | SMART | AAA_5 | 45 | 244 | IPR003593 | - | |
Bva13g02417 | 639 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 11 | 7 | 383 | - | - | |
Bva13g02417 | 639 | MobiDBLite | consensus disorder prediction | 619 | 639 | - | - | |
Bva13g02417 | 639 | MobiDBLite | consensus disorder prediction | 612 | 639 | - | - | |
Bva13g02417 | 639 | Pfam | ABC transporter | 38 | 187 | IPR003439 | GO:0005524 | |
Bva13g02417 | 639 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 8 | 259 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva13g02417 | Bva-Chr13 | 18301067 | 18304171 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva13g02417 | 43 | 219 | Calmodulin-binding Proteins | AT2G36910 | 29.032 | 4.57e-09 | 57.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva13g02417 | K05681 | - | gmx:100802207 | 872.463 |