Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva13g02414 | ATGGGAATTGCACGGAGACAGTTGAAGGTCATGCTCAGGAAGAACTGGCTTCTCAAAATTCGTCATCCTTACGTTACATGTGCCGAGATTTTACTCCCCACGGTTGTAATGTTGCTGTTAATAGCTGTAAGGACTCGAGTGGATACACAAATTCATCCAGCTCAATCGCATATACAAAAAGAGCTTTTTGTCGAAGTGGGCAGAGGAATATCCCCTAGTTTCCAACAAGTTTTGGAATTGTTGTTGGCTAAGGGGGAATATTTAGCTTTTGTACCAGATACAAAAGAGACAAAGATGATGATAGACGTAATGTCAATAAAATTTCCCCTGTTGAAGCTTGTTAGCAGAGTATACAAAGATGAGCTAGAGCTGGAAACCTACATACGTTCAGATGTTTATGGTTCCTGTGGTCAAGCAAGGAATTGTTCAAATCCCAAAATCAAAGGAGCAGTTGTATTTCATGAACAAGGTCCTCAGTCATTTGATTATAGCATACGCCTCAATCATACTTGGGCTTTCTCTGGTTTCCCTGATGTTAAATCTATAATGGACACTAATGGTCCCTTTCTCAACGACTTGGAAATGAGTCTTAGTGCTATACCAACGATGCAATACAGCTTCAGTGGGTTTTTGACTCTCCAGCAAGTGGTTGATTCATTCATAATATTCATTTCTCAGCAGTCTGACATAAACCCCACTAGGGAAACTATAGAACTTCCTCTATCAGGCTCCCATGACActaatttctctttcaaagTTCCATGGACCCAATATAACCCTTCCCACATACGAATTGCTCCATTTCCTACACGTGAGTACACCGATGACCAGTTCCAGTCAATTGTAAAGAATGTCATGGGAATATTGTACTTATTGGGATTTCTCTATCCAATTTCTCGGCTGATCAGTTATTCTGTGTTTGAGAAGgaagaaaagattaaagaaGGACTCTACATGATGGGCCTGAAAGATGGTGTATTCCATCTATCATGGTTTATTACGTATGCTTTGCAGTTTGCAGTTTCTTCTGGGATTATTACAGCTTGCACCATGGATAATCTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTGATATCAACCTTTTTCAAACGGGCCAAAACAGCTGTAGCAGTTGgaactctttcttttcttggtgctttttttccttattacaCTGTCAATGATGAAGCAGTCTCTATGATCTTGAAGGTTATTGCTTCTCTGCTTTCTCCTACGGCCTTTGCTTTGGGGTCAATCAACTTTGCAGATTATGAGCAGGCTCATGTTGGACTTCGTTGGAGCAACATATGGCGAGAATCATCGGGAGTGAATTTTTTGGTCTGTTTTTCAATGATGCTGCTAGATACGCTATTGTATTGTGCAATTGGTCTTTATCTTGCTAAGGTTCTTCCAAGGGAGTATGGATTGCAATATCCATGGAACTTTATTTTTCGCAAAGGCTTctggacaaagaaaaaaaatgtagggGGTTGTTCGTCCAGCTTGGAAGTTAAAATTGCTGATAAGATTTCTGAGTCAAAAGGAAGTTGTTTAGGGGAAGATATTTTTCAACCCACTATGGAAGCAATAAGCTTGGACATGAAACAGCAACAGCTCGATAGCAGGTGTATTCAAATTAGGAATTTGCATAAAGTGTATGCTACCAAAAAAGGGGATTGCTATGCTGTCAACTCATTGCAGCTTTCATTATATGAAAATCAGATTCTTGCTCTTCTTGGACATAACGGAGCTGGAAAAAGCACAACAATCTCAATGCTTGTTGGCCTTCTTCCTCCTACTTCAGGGGATGCTCTGGTGTTTGGAAAGAATATCTTGTCAGACATTGATGAGATACGGAAGAGCTTGGGTGTTTGCCCACAAAATGATATACTCTTTCCAGAACTGACTGTGAGAGAGCATCTAGAAATATTTGCTGTCTTAAAGGGTGTGGATGAAGATTCTTTGGATTCTGTTGTTACTAATATGGTTGATGAGGTGGGCTTGGCTGATAAAGTCAACACTGTTGTGAGAGCTTTATCTGGTGgcatgaaaaggaaattatctCTTGGAATTGCGTTGATAGGAAATAGTAAGGTTGTTGTTCTTGATGAACCTACCAGTGGAATGGATCCATATTCAATGCGATTAACTTGgcagttaataaaaaaaattaagaagggCAGGATAATATTACTAACAACGCATTCTATGGACGAAGCAGATGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTAAAATGTTGTGGAAGTTCCCTTTTCTTGAAGCATCACTATGGGGTTGGTTATACTCTTACTCTTGCGAAGTCAGCACCTACTGCTTCTGTGGCTGCTGATATTGTACATCGCCATGTTCCATCAGCAACCTGCGTGAGTGAGGTGGGAACTGAGATCTCCTTCAGGCTTCCTCTTGCATCTTCACCAGCCTTTGAAAATATGTTCAGGGAAATTGAAAGTTGCATGAGAAAACCTGTTTCTAACCTTGAGTCCTGTGGTGGTGGTGAGAAAGATAGTTTTGGAATTGAAAGCTATGGTATATCCGTCACAACCCTTGAGGAAGTATTCTTAAGAGTTGCGGGTTGTGACCATGATGAAGTTGAATGCTTTGAGGAGAAAAGCGGTTCCGTTATAACAAACTCTATGGCTTCTCATGCTTCCTATGGTCATCCATCCAccaaaatattacattttgaagtttttgggAATTATAGGAAGATTCTTGGGTTCATATCTAGTACAGTGGGAAAAGCTtgtggtttaattttttcagcAGTTCTAAGTCTTATAAACTTATTGGGTATGCAGTGCTGTGGCTGCTGTGTCATTACTAGGTCAACATTTTGGCGACATTCTAAAGCTTTGCTCATTAAGAGGGCAGTATCAGCTCGTAGAGATCACAAAACAATTGTTTTCCAGCTTCTGATTCCTGCGGTCTTCTTGTTTATtggtcttctttttcttgagcTGAAGCCTCATCCTGATCAGCAGTCACTGATTCTCACAACATCTCATTTTAATCCTCTTTTGAgcggtggtggtggtgggggCCCAATTCCTTTTGATCTGTCTTTGCCAGTTGCACAAAAGGTAGCACATTATGTCAAAGGAGGGTGGATTCAAAGGTTCAAACCAAGTGATTTCAGATTCCCTGATCCAGGAAAAGCATTGGCTGATGCAGTGGAAGCAGCCGGGCCGACCCTGGGACCTGCTCTTCTATCAATAAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAGTCAAGGTATGGAGCAATTGTAATGGATGATCTCAATAATGATGGGAGTTTAGGCTACACTGTATTGCACAACTTTTCTTGTCAGCATGCTGGTCcaacttttatcaatttgatgaaTGCGGCAATTCTTAGGTTTGCTACTGATGATGTAAATATGACAATTCAAACGCGTAACCACCCTCTACCAATGACACAAAGCCAGCACTTGCAACGTCATGATCTGGATGCGTTCTCTGCTGCAGTTATTATCAGTATTGCATTCTCTTTTGTTCCTGCCTCATTTGCTGTTTCTGTTGTGAAGGAACGTGAAGTAAAAGCTAAACACCAACAACTGATCAGCGGGGTTTCTATCCTTTCCTATTGGACTTCTACATTTATCTGGGACGTCGTCAGCTTCTTATTTCCTGCATCTTTTGCAGTGGTTCTCTTATGCATCTTCGgTCTTGATCAGTTCGTTGGAGGGGCTTCTTTGTTGCCAACCATCCTCATCTTTTTGGAGTACGGGCTAGCAATTGCATCATCAACATACTgcctcacttttttcttttctgaccaTACCATGGCTCAGAATGTGGTTCTCCTGGTCCATTTCTTCTCTGGATTAATACTAATGGTTATCTCGTTCATAATGGGTGTAATTCCATCAACAACGAGTGCCAATTCTTTTCTTAAGaattttttcaGAATATCTCCTGGATTTTGTTTTGCTGATGGACTTGCTTCATTAGCTCTTCTGCGGCAAGGGATGAAAGATAAAACAAGTCATGGGGTGTTTGATTGGAATGTTGCTGGTGCATCCCTTTGTTATCTTGCTGTTGAGAGTTTTGGTTACTTTCTCTTAACACTTGCACTTGAAGCTTTTCCTTCTCTCAAATTTACTCCACTCATGATCAAAAAGTGGATGGGCAGTATTAATTTCTTCCAGCATAATTCTCCTTATGTGGAGCCTCTATTAGAACCTTGCTCAGGAACTGTTGCTTTGGACCTTGACGAAGATGTAGATGTGAAAACAGAAAGAACAAGAGTACTTTCAGGTTCCCTTGACAATGCCATCATCTACTTGCGTAATCTCTGTAAGgTGTTTCCTGAAGGGAAGCATCATGGACAAAAGGTTGCAGTAGATTCCTTAACCTTCTCAGTTCAGGCAGGAGAATGTTTTGGCTTCTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGCTGTGTGGGGAGGAATATCCTTCTGATGGGactgcttttatttttggaaaagatATATGCGCACATCCCAAAGCTGCTTGCCAACATATTGGATATTGTCCACAATTTGATGCtctattagaatttttaacaGTCCAAGAACATCTTGAGCTTTATGCTAGAATAAAAGGCGTTCCAGATTACAGGATAAACAATGTTGTTATGGAAAAGTTGGAGGAGTTTGACTTGTTGAAGCATGCAAATAAACCGTCCTTTTCACTTAGTGGaggaaataaaaggaaactaTCTGttgcaattgcaatgatcGGAGATCCTCCTATAGTCATTCTTGACGAGCCATCTACAGGCATGGATCCCATTGCCAAACGATTTATGTGGGATGTCATATCTAGGATTTCAACAAGACGAGGAAAGACAGCAGTAATTCTTACTACACACAGCATGAATGAAGCTCAAGCCTTGTGCACCCGAATAGGGATAATGGTGGGTGGACGATTGAGATGCATTGGAAGTCCACAGCATTTGAAAACAAGATTTGGGAATCATCTGGAACTAGAGGTGAAACCTACTGAAGTGAGCTCTTTCGACTTGGAGATCCTCTGCCAAGCCATTCAAGAGAAACTTTTTGATACTCCTTCTCATCCTAGAAGCTTGCTTGATGACCTTGAGGTTTGCATTGGGGGCACCAACTCCATTGTATCAGAAAATGTCTCCATCACAGAGATTAGCTTGTCACAAGAAATGATTGTCCTAATTGGTTGCTGGcttggaaatgaagaaagagttAAGACACTTGTTTCTGGTACGCCTGTTGCTGATGGGGTTTTCAATGAGCAGTTATCGGAACAATTGTTTCGAGATGgtgGTATTCCATTGCCAGTGTTTTCTGAGTGGTGGTTGTCTAAAGAAAAGTTTTCAGCAATTGATTCCTTTATTCTATCTTCATTTTCTGGAGCAAGATGCCAAGGATGCAATGGTTTGAGCGCAAGATATCAGTTGCCATATGGTGAAGGGTTCTCTCTTTCAGATGTTTTTGGACTTCTTGAAGGAAACAGAAATAGACTTGGCATTGCAGAGTACAGCATCAGCCAATCAACTCTGGAGACCATATTTAACCATTTTGCGGCTAATTCATG | 5678 | 0.3845 | MGIARRQLKVMLRKNWLLKIRHPYVTCAEILLPTVVMLLLIAVRTRVDTQIHPAQSHIQKELFVEVGRGISPSFQQVLELLLAKGEYLAFVPDTKETKMMIDVMSIKFPLLKLVSRVYKDELELETYIRSDVYGSCGQARNCSNPKIKGAVVFHEQGPQSFDYSIRLNHTWAFSGFPDVKSIMDTNGPFLNDLEMSLSAIPTMQYSFSGFLTLQQVVDSFIIFISQQSDINPTRETIELPLSGSHDTNFSFKVPWTQYNPSHIRIAPFPTREYTDDQFQSIVKNVMGILYLLGFLYPISRLISYSVFEKEEKIKEGLYMMGLKDGVFHLSWFITYALQFAVSSGIITACTMDNLFKYSDKTLVFAYFFIFGLSAIMLSFLISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEAVSMILKVIASLLSPTAFALGSINFADYEQAHVGLRWSNIWRESSGVNFLVCFSMMLLDTLLYCAIGLYLAKVLPREYGLQYPWNFIFRKGFWTKKKNVGGCSSSLEVKIADKISESKGSCLGEDIFQPTMEAISLDMKQQQLDSRCIQIRNLHKVYATKKGDCYAVNSLQLSLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNILSDIDEIRKSLGVCPQNDILFPELTVREHLEIFAVLKGVDEDSLDSVVTNMVDEVGLADKVNTVVRALSGGMKRKLSLGIALIGNSKVVVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLAKSAPTASVAADIVHRHVPSATCVSEVGTEISFRLPLASSPAFENMFREIESCMRKPVSNLESCGGGEKDSFGIESYGISVTTLEEVFLRVAGCDHDEVECFEEKSGSVITNSMASHASYGHPSTKILHFEVFGNYRKILGFISSTVGKACGLIFSAVLSLINLLGMQCCGCCVITRSTFWRHSKALLIKRAVSARRDHKTIVFQLLIPAVFLFIGLLFLELKPHPDQQSLILTTSHFNPLLSGGGGGGPIPFDLSLPVAQKVAHYVKGGWIQRFKPSDFRFPDPGKALADAVEAAGPTLGPALLSISEYLMSSFNESYQSRYGAIVMDDLNNDGSLGYTVLHNFSCQHAGPTFINLMNAAILRFATDDVNMTIQTRNHPLPMTQSQHLQRHDLDAFSAAVIISIAFSFVPASFAVSVVKEREVKAKHQQLISGVSILSYWTSTFIWDVVSFLFPASFAVVLLCIFGLDQFVGGASLLPTILIFLEYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFSGLILMVISFIMGVIPSTTSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSHGVFDWNVAGASLCYLAVESFGYFLLTLALEAFPSLKFTPLMIKKWMGSINFFQHNSPYVEPLLEPCSGTVALDLDEDVDVKTERTRVLSGSLDNAIIYLRNLCKVFPEGKHHGQKVAVDSLTFSVQAGECFGFLGTNGAGKTTTLSMLCGEEYPSDGTAFIFGKDICAHPKAACQHIGYCPQFDALLEFLTVQEHLELYARIKGVPDYRINNVVMEKLEEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSFDLEILCQAIQEKLFDTPSHPRSLLDDLEVCIGGTNSIVSENVSITEISLSQEMIVLIGCWLGNEERVKTLVSGTPVADGVFNEQLSEQLFRDGGIPLPVFSEWWLSKEKFSAIDSFILSSFSGARCQGCNGLSARYQLPYGEGFSLSDVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS | 1892 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva13g02414 | 1892 | Gene3D | - | 1456 | 1705 | IPR027417 | - | |
Bva13g02414 | 1892 | Gene3D | - | 547 | 794 | IPR027417 | - | |
Bva13g02414 | 1892 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | 1656 | 1889 | IPR026082 | GO:0016021|GO:0055085|GO:0140359 | |
Bva13g02414 | 1892 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | 6 | 1318 | IPR026082 | GO:0016021|GO:0055085|GO:0140359 | |
Bva13g02414 | 1892 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | 1315 | 1662 | IPR026082 | GO:0016021|GO:0055085|GO:0140359 | |
Bva13g02414 | 1892 | Pfam | ABC transporter | 580 | 723 | IPR003439 | GO:0005524 | |
Bva13g02414 | 1892 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1459 | 1696 | IPR027417 | - | |
Bva13g02414 | 1892 | CDD | ABC_subfamily_A | 1464 | 1690 | - | - | |
Bva13g02414 | 1892 | ProSitePatterns | ABC transporters family signature. | 695 | 709 | IPR017871 | GO:0005524 | |
Bva13g02414 | 1892 | ProSitePatterns | ABC transporters family signature. | 1601 | 1615 | IPR017871 | GO:0005524 | |
Bva13g02414 | 1892 | CDD | ABC_subfamily_A | 560 | 781 | - | - | |
Bva13g02414 | 1892 | PANTHER | ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B | 1656 | 1889 | - | - | |
Bva13g02414 | 1892 | PANTHER | ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B | 6 | 1318 | - | - | |
Bva13g02414 | 1892 | PANTHER | ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B | 1315 | 1662 | - | - | |
Bva13g02414 | 1892 | Pfam | ABC-2 family transporter protein | 260 | 480 | - | - | |
Bva13g02414 | 1892 | Pfam | ABC-2 family transporter protein | 992 | 1394 | - | - | |
Bva13g02414 | 1892 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 559 | 779 | IPR027417 | - | |
Bva13g02414 | 1892 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1464 | 1702 | IPR003439 | GO:0005524 | |
Bva13g02414 | 1892 | Pfam | ABC transporter | 1486 | 1628 | IPR003439 | GO:0005524 | |
Bva13g02414 | 1892 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 560 | 793 | IPR003439 | GO:0005524 | |
Bva13g02414 | 1892 | SMART | AAA_5 | 588 | 770 | IPR003593 | - | |
Bva13g02414 | 1892 | SMART | AAA_5 | 1494 | 1681 | IPR003593 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva13g02414 | Bva-Chr13 | 18261276 | 18285196 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva13g02414 | 540 | 786 | Calmodulin-binding Proteins | AT2G36910 | 25.287 | 3.64e-16 | 83.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva13g02414 | K05643 | - | gmx:100803263 | 3178.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva13g02414 | 13 | 18261276 | 18285196 | Bva13g02414 | 13 | 18261276 | 18285196 | ECH |