Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02414 ATGGGAATTGCACGGAGACAGTTGAAGGTCATGCTCAGGAAGAACTGGCTTCTCAAAATTCGTCATCCTTACGTTACATGTGCCGAGATTTTACTCCCCACGGTTGTAATGTTGCTGTTAATAGCTGTAAGGACTCGAGTGGATACACAAATTCATCCAGCTCAATCGCATATACAAAAAGAGCTTTTTGTCGAAGTGGGCAGAGGAATATCCCCTAGTTTCCAACAAGTTTTGGAATTGTTGTTGGCTAAGGGGGAATATTTAGCTTTTGTACCAGATACAAAAGAGACAAAGATGATGATAGACGTAATGTCAATAAAATTTCCCCTGTTGAAGCTTGTTAGCAGAGTATACAAAGATGAGCTAGAGCTGGAAACCTACATACGTTCAGATGTTTATGGTTCCTGTGGTCAAGCAAGGAATTGTTCAAATCCCAAAATCAAAGGAGCAGTTGTATTTCATGAACAAGGTCCTCAGTCATTTGATTATAGCATACGCCTCAATCATACTTGGGCTTTCTCTGGTTTCCCTGATGTTAAATCTATAATGGACACTAATGGTCCCTTTCTCAACGACTTGGAAATGAGTCTTAGTGCTATACCAACGATGCAATACAGCTTCAGTGGGTTTTTGACTCTCCAGCAAGTGGTTGATTCATTCATAATATTCATTTCTCAGCAGTCTGACATAAACCCCACTAGGGAAACTATAGAACTTCCTCTATCAGGCTCCCATGACActaatttctctttcaaagTTCCATGGACCCAATATAACCCTTCCCACATACGAATTGCTCCATTTCCTACACGTGAGTACACCGATGACCAGTTCCAGTCAATTGTAAAGAATGTCATGGGAATATTGTACTTATTGGGATTTCTCTATCCAATTTCTCGGCTGATCAGTTATTCTGTGTTTGAGAAGgaagaaaagattaaagaaGGACTCTACATGATGGGCCTGAAAGATGGTGTATTCCATCTATCATGGTTTATTACGTATGCTTTGCAGTTTGCAGTTTCTTCTGGGATTATTACAGCTTGCACCATGGATAATCTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTGATATCAACCTTTTTCAAACGGGCCAAAACAGCTGTAGCAGTTGgaactctttcttttcttggtgctttttttccttattacaCTGTCAATGATGAAGCAGTCTCTATGATCTTGAAGGTTATTGCTTCTCTGCTTTCTCCTACGGCCTTTGCTTTGGGGTCAATCAACTTTGCAGATTATGAGCAGGCTCATGTTGGACTTCGTTGGAGCAACATATGGCGAGAATCATCGGGAGTGAATTTTTTGGTCTGTTTTTCAATGATGCTGCTAGATACGCTATTGTATTGTGCAATTGGTCTTTATCTTGCTAAGGTTCTTCCAAGGGAGTATGGATTGCAATATCCATGGAACTTTATTTTTCGCAAAGGCTTctggacaaagaaaaaaaatgtagggGGTTGTTCGTCCAGCTTGGAAGTTAAAATTGCTGATAAGATTTCTGAGTCAAAAGGAAGTTGTTTAGGGGAAGATATTTTTCAACCCACTATGGAAGCAATAAGCTTGGACATGAAACAGCAACAGCTCGATAGCAGGTGTATTCAAATTAGGAATTTGCATAAAGTGTATGCTACCAAAAAAGGGGATTGCTATGCTGTCAACTCATTGCAGCTTTCATTATATGAAAATCAGATTCTTGCTCTTCTTGGACATAACGGAGCTGGAAAAAGCACAACAATCTCAATGCTTGTTGGCCTTCTTCCTCCTACTTCAGGGGATGCTCTGGTGTTTGGAAAGAATATCTTGTCAGACATTGATGAGATACGGAAGAGCTTGGGTGTTTGCCCACAAAATGATATACTCTTTCCAGAACTGACTGTGAGAGAGCATCTAGAAATATTTGCTGTCTTAAAGGGTGTGGATGAAGATTCTTTGGATTCTGTTGTTACTAATATGGTTGATGAGGTGGGCTTGGCTGATAAAGTCAACACTGTTGTGAGAGCTTTATCTGGTGgcatgaaaaggaaattatctCTTGGAATTGCGTTGATAGGAAATAGTAAGGTTGTTGTTCTTGATGAACCTACCAGTGGAATGGATCCATATTCAATGCGATTAACTTGgcagttaataaaaaaaattaagaagggCAGGATAATATTACTAACAACGCATTCTATGGACGAAGCAGATGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTAAAATGTTGTGGAAGTTCCCTTTTCTTGAAGCATCACTATGGGGTTGGTTATACTCTTACTCTTGCGAAGTCAGCACCTACTGCTTCTGTGGCTGCTGATATTGTACATCGCCATGTTCCATCAGCAACCTGCGTGAGTGAGGTGGGAACTGAGATCTCCTTCAGGCTTCCTCTTGCATCTTCACCAGCCTTTGAAAATATGTTCAGGGAAATTGAAAGTTGCATGAGAAAACCTGTTTCTAACCTTGAGTCCTGTGGTGGTGGTGAGAAAGATAGTTTTGGAATTGAAAGCTATGGTATATCCGTCACAACCCTTGAGGAAGTATTCTTAAGAGTTGCGGGTTGTGACCATGATGAAGTTGAATGCTTTGAGGAGAAAAGCGGTTCCGTTATAACAAACTCTATGGCTTCTCATGCTTCCTATGGTCATCCATCCAccaaaatattacattttgaagtttttgggAATTATAGGAAGATTCTTGGGTTCATATCTAGTACAGTGGGAAAAGCTtgtggtttaattttttcagcAGTTCTAAGTCTTATAAACTTATTGGGTATGCAGTGCTGTGGCTGCTGTGTCATTACTAGGTCAACATTTTGGCGACATTCTAAAGCTTTGCTCATTAAGAGGGCAGTATCAGCTCGTAGAGATCACAAAACAATTGTTTTCCAGCTTCTGATTCCTGCGGTCTTCTTGTTTATtggtcttctttttcttgagcTGAAGCCTCATCCTGATCAGCAGTCACTGATTCTCACAACATCTCATTTTAATCCTCTTTTGAgcggtggtggtggtgggggCCCAATTCCTTTTGATCTGTCTTTGCCAGTTGCACAAAAGGTAGCACATTATGTCAAAGGAGGGTGGATTCAAAGGTTCAAACCAAGTGATTTCAGATTCCCTGATCCAGGAAAAGCATTGGCTGATGCAGTGGAAGCAGCCGGGCCGACCCTGGGACCTGCTCTTCTATCAATAAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAGTCAAGGTATGGAGCAATTGTAATGGATGATCTCAATAATGATGGGAGTTTAGGCTACACTGTATTGCACAACTTTTCTTGTCAGCATGCTGGTCcaacttttatcaatttgatgaaTGCGGCAATTCTTAGGTTTGCTACTGATGATGTAAATATGACAATTCAAACGCGTAACCACCCTCTACCAATGACACAAAGCCAGCACTTGCAACGTCATGATCTGGATGCGTTCTCTGCTGCAGTTATTATCAGTATTGCATTCTCTTTTGTTCCTGCCTCATTTGCTGTTTCTGTTGTGAAGGAACGTGAAGTAAAAGCTAAACACCAACAACTGATCAGCGGGGTTTCTATCCTTTCCTATTGGACTTCTACATTTATCTGGGACGTCGTCAGCTTCTTATTTCCTGCATCTTTTGCAGTGGTTCTCTTATGCATCTTCGgTCTTGATCAGTTCGTTGGAGGGGCTTCTTTGTTGCCAACCATCCTCATCTTTTTGGAGTACGGGCTAGCAATTGCATCATCAACATACTgcctcacttttttcttttctgaccaTACCATGGCTCAGAATGTGGTTCTCCTGGTCCATTTCTTCTCTGGATTAATACTAATGGTTATCTCGTTCATAATGGGTGTAATTCCATCAACAACGAGTGCCAATTCTTTTCTTAAGaattttttcaGAATATCTCCTGGATTTTGTTTTGCTGATGGACTTGCTTCATTAGCTCTTCTGCGGCAAGGGATGAAAGATAAAACAAGTCATGGGGTGTTTGATTGGAATGTTGCTGGTGCATCCCTTTGTTATCTTGCTGTTGAGAGTTTTGGTTACTTTCTCTTAACACTTGCACTTGAAGCTTTTCCTTCTCTCAAATTTACTCCACTCATGATCAAAAAGTGGATGGGCAGTATTAATTTCTTCCAGCATAATTCTCCTTATGTGGAGCCTCTATTAGAACCTTGCTCAGGAACTGTTGCTTTGGACCTTGACGAAGATGTAGATGTGAAAACAGAAAGAACAAGAGTACTTTCAGGTTCCCTTGACAATGCCATCATCTACTTGCGTAATCTCTGTAAGgTGTTTCCTGAAGGGAAGCATCATGGACAAAAGGTTGCAGTAGATTCCTTAACCTTCTCAGTTCAGGCAGGAGAATGTTTTGGCTTCTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGCTGTGTGGGGAGGAATATCCTTCTGATGGGactgcttttatttttggaaaagatATATGCGCACATCCCAAAGCTGCTTGCCAACATATTGGATATTGTCCACAATTTGATGCtctattagaatttttaacaGTCCAAGAACATCTTGAGCTTTATGCTAGAATAAAAGGCGTTCCAGATTACAGGATAAACAATGTTGTTATGGAAAAGTTGGAGGAGTTTGACTTGTTGAAGCATGCAAATAAACCGTCCTTTTCACTTAGTGGaggaaataaaaggaaactaTCTGttgcaattgcaatgatcGGAGATCCTCCTATAGTCATTCTTGACGAGCCATCTACAGGCATGGATCCCATTGCCAAACGATTTATGTGGGATGTCATATCTAGGATTTCAACAAGACGAGGAAAGACAGCAGTAATTCTTACTACACACAGCATGAATGAAGCTCAAGCCTTGTGCACCCGAATAGGGATAATGGTGGGTGGACGATTGAGATGCATTGGAAGTCCACAGCATTTGAAAACAAGATTTGGGAATCATCTGGAACTAGAGGTGAAACCTACTGAAGTGAGCTCTTTCGACTTGGAGATCCTCTGCCAAGCCATTCAAGAGAAACTTTTTGATACTCCTTCTCATCCTAGAAGCTTGCTTGATGACCTTGAGGTTTGCATTGGGGGCACCAACTCCATTGTATCAGAAAATGTCTCCATCACAGAGATTAGCTTGTCACAAGAAATGATTGTCCTAATTGGTTGCTGGcttggaaatgaagaaagagttAAGACACTTGTTTCTGGTACGCCTGTTGCTGATGGGGTTTTCAATGAGCAGTTATCGGAACAATTGTTTCGAGATGgtgGTATTCCATTGCCAGTGTTTTCTGAGTGGTGGTTGTCTAAAGAAAAGTTTTCAGCAATTGATTCCTTTATTCTATCTTCATTTTCTGGAGCAAGATGCCAAGGATGCAATGGTTTGAGCGCAAGATATCAGTTGCCATATGGTGAAGGGTTCTCTCTTTCAGATGTTTTTGGACTTCTTGAAGGAAACAGAAATAGACTTGGCATTGCAGAGTACAGCATCAGCCAATCAACTCTGGAGACCATATTTAACCATTTTGCGGCTAATTCATG 5678 0.3845 MGIARRQLKVMLRKNWLLKIRHPYVTCAEILLPTVVMLLLIAVRTRVDTQIHPAQSHIQKELFVEVGRGISPSFQQVLELLLAKGEYLAFVPDTKETKMMIDVMSIKFPLLKLVSRVYKDELELETYIRSDVYGSCGQARNCSNPKIKGAVVFHEQGPQSFDYSIRLNHTWAFSGFPDVKSIMDTNGPFLNDLEMSLSAIPTMQYSFSGFLTLQQVVDSFIIFISQQSDINPTRETIELPLSGSHDTNFSFKVPWTQYNPSHIRIAPFPTREYTDDQFQSIVKNVMGILYLLGFLYPISRLISYSVFEKEEKIKEGLYMMGLKDGVFHLSWFITYALQFAVSSGIITACTMDNLFKYSDKTLVFAYFFIFGLSAIMLSFLISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEAVSMILKVIASLLSPTAFALGSINFADYEQAHVGLRWSNIWRESSGVNFLVCFSMMLLDTLLYCAIGLYLAKVLPREYGLQYPWNFIFRKGFWTKKKNVGGCSSSLEVKIADKISESKGSCLGEDIFQPTMEAISLDMKQQQLDSRCIQIRNLHKVYATKKGDCYAVNSLQLSLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNILSDIDEIRKSLGVCPQNDILFPELTVREHLEIFAVLKGVDEDSLDSVVTNMVDEVGLADKVNTVVRALSGGMKRKLSLGIALIGNSKVVVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLAKSAPTASVAADIVHRHVPSATCVSEVGTEISFRLPLASSPAFENMFREIESCMRKPVSNLESCGGGEKDSFGIESYGISVTTLEEVFLRVAGCDHDEVECFEEKSGSVITNSMASHASYGHPSTKILHFEVFGNYRKILGFISSTVGKACGLIFSAVLSLINLLGMQCCGCCVITRSTFWRHSKALLIKRAVSARRDHKTIVFQLLIPAVFLFIGLLFLELKPHPDQQSLILTTSHFNPLLSGGGGGGPIPFDLSLPVAQKVAHYVKGGWIQRFKPSDFRFPDPGKALADAVEAAGPTLGPALLSISEYLMSSFNESYQSRYGAIVMDDLNNDGSLGYTVLHNFSCQHAGPTFINLMNAAILRFATDDVNMTIQTRNHPLPMTQSQHLQRHDLDAFSAAVIISIAFSFVPASFAVSVVKEREVKAKHQQLISGVSILSYWTSTFIWDVVSFLFPASFAVVLLCIFGLDQFVGGASLLPTILIFLEYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFSGLILMVISFIMGVIPSTTSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSHGVFDWNVAGASLCYLAVESFGYFLLTLALEAFPSLKFTPLMIKKWMGSINFFQHNSPYVEPLLEPCSGTVALDLDEDVDVKTERTRVLSGSLDNAIIYLRNLCKVFPEGKHHGQKVAVDSLTFSVQAGECFGFLGTNGAGKTTTLSMLCGEEYPSDGTAFIFGKDICAHPKAACQHIGYCPQFDALLEFLTVQEHLELYARIKGVPDYRINNVVMEKLEEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSFDLEILCQAIQEKLFDTPSHPRSLLDDLEVCIGGTNSIVSENVSITEISLSQEMIVLIGCWLGNEERVKTLVSGTPVADGVFNEQLSEQLFRDGGIPLPVFSEWWLSKEKFSAIDSFILSSFSGARCQGCNGLSARYQLPYGEGFSLSDVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS 1892
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02414 1892 Gene3D - 1456 1705 IPR027417 -
Bva13g02414 1892 Gene3D - 547 794 IPR027417 -
Bva13g02414 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1656 1889 IPR026082 GO:0016021|GO:0055085|GO:0140359
Bva13g02414 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 1318 IPR026082 GO:0016021|GO:0055085|GO:0140359
Bva13g02414 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1315 1662 IPR026082 GO:0016021|GO:0055085|GO:0140359
Bva13g02414 1892 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Bva13g02414 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1459 1696 IPR027417 -
Bva13g02414 1892 CDD ABC_subfamily_A 1464 1690 - -
Bva13g02414 1892 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524
Bva13g02414 1892 ProSitePatterns ABC transporters family signature. 1601 1615 IPR017871 GO:0005524
Bva13g02414 1892 CDD ABC_subfamily_A 560 781 - -
Bva13g02414 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1656 1889 - -
Bva13g02414 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 6 1318 - -
Bva13g02414 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1315 1662 - -
Bva13g02414 1892 Pfam ABC-2 family transporter protein 260 480 - -
Bva13g02414 1892 Pfam ABC-2 family transporter protein 992 1394 - -
Bva13g02414 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 779 IPR027417 -
Bva13g02414 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1464 1702 IPR003439 GO:0005524
Bva13g02414 1892 Pfam ABC transporter 1486 1628 IPR003439 GO:0005524
Bva13g02414 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Bva13g02414 1892 SMART AAA_5 588 770 IPR003593 -
Bva13g02414 1892 SMART AAA_5 1494 1681 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva13g02414 Bva-Chr13 18261276 18285196 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02414 540 786 Calmodulin-binding Proteins AT2G36910 25.287 3.64e-16 83.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02414 K05643 - gmx:100803263 3178.65
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02414 13 18261276 18285196 Bva13g02414 13 18261276 18285196 ECH