Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02413 ATGGCTTCATCTTCCTCTGATCCTGGTAAGTCTGAAGTTGGTTGTGGCAGTGGTAGCGGCGGCGGTGGTGCGGAGACTTCGGAAGCAGCGATGACCAACGATCAACTCTTACTATACAGGGGATTGAAGAAAGCGAAGAAGGAGAGAGGGTGTACAGCCAAAGAACGCATCAGCAAAATGCCTCCTTGTGCTGCGGGGAAACGCAGCTCCATTTACCGAGGTGTCACTAGGCATAGATGGACTGGTCGTTATGAAGCACACCTTTGGGATAAAAGCACATGGAACCAGAATCAGaacaagaaaggaaagcaAGGGGCATATGATGATGAGGAGGCTGCAGCTAGAGCATATGACCTTGCTGCTCTAAAATACTGGGGTCCAGGGACTCTCATTAACTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATACCTTGCATCTTTACGGCGGAAGAGCAGTGGGTTTTCAAGAGGAATCTCTAAATATCGTGGACTCTCAAGTCGATGGGAGTCATCATATGGTCGTATGGGAGGATCCGAATACTTCAATAGCATACATTATGCTACAGGAGATGATTCGGCAGCAGAAAGTGAATATGTAAGTGGTTTCTGCGTAGAAAGAAAGATTGATTTAacaaattacatcaaatggTGGGGATCCAATAAAAGTCGCCAACCTGATGTTGGAACAAAATcgtcagaagaaaaaaagcagGGTTTTTCTGGAGATATATGCAGTGAACTCAAAACATTGGAACAGAAAGTGCCACCTGCTGAGCCATACCAAATGCCACAATTAGGCATGCCACATGACACtaaaaagcataaaagttCTTCAGTCTCTGCCTTAAGTATCTTATCCCGATCAGCTGCCTATAAGAGCTTGGAAGATAAAGCatcaaagagaaaggaaagttGCACTGATAATGATGAGAATGAAAACAAGAATACCATCAACAAATTGGATCACGGCAAGGCTGTTGAGAAATCATCAAATCATGATAGTGGCAATGAAAGACTTGACGTTGCAATGGGAATGAGTGGGGCATTGTCTCTTCAAAGAAATGTTTACCCATTGGCGCCATTCTTGTCTGCACCACTTTTGACAGCTTATAATACTGTTGATCCCTTGGTAGATTCTGTTCTCTGGACGCCTCTTGTTCCTATGCTTTCCACCAGCCTTTCTCGTACAGCTGAGGTTACAAAGACTGAGACTAGTTCCAGTTATACTATCTTCCGGCCAGATGAGTG 1277 0.4166 MASSSSDPGKSEVGCGSGSGGGGAETSEAAMTNDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLSSRWESSYGRMGGSEYFNSIHYATGDDSAAESEYVSGFCVERKIDLTNYIKWWGSNKSRQPDVGTKSSEEKKQGFSGDICSELKTLEQKVPPAEPYQMPQLGMPHDTKKHKSSSVSALSILSRSAAYKSLEDKASKRKESCTDNDENENKNTINKLDHGKAVEKSSNHDSGNERLDVAMGMSGALSLQRNVYPLAPFLSAPLLTAYNTVDPLVDSVLWTPLVPMLSTSLSRTAEVTKTETSSSYTIFRPDE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02413 425 ProSiteProfiles AP2/ERF domain profile. 71 134 IPR001471 GO:0003700|GO:0006355
Bva13g02413 425 MobiDBLite consensus disorder prediction 305 348 - -
Bva13g02413 425 Pfam AP2 domain 71 126 IPR001471 GO:0003700|GO:0006355
Bva13g02413 425 SUPERFAMILY DNA-binding domain 70 135 IPR016177 GO:0003677
Bva13g02413 425 MobiDBLite consensus disorder prediction 268 288 - -
Bva13g02413 425 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Bva13g02413 425 PRINTS Ethylene responsive element binding protein signature 116 136 IPR001471 GO:0003700|GO:0006355
Bva13g02413 425 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 419 - -
Bva13g02413 425 SMART rav1_2 71 140 IPR001471 GO:0003700|GO:0006355
Bva13g02413 425 MobiDBLite consensus disorder prediction 305 345 - -
Bva13g02413 425 Gene3D AP2/ERF domain 71 136 IPR036955 GO:0003700|GO:0006355
Bva13g02413 425 MobiDBLite consensus disorder prediction 1 29 - -
Bva13g02413 425 PANTHER BNAA03G19580D PROTEIN 14 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02413 Bva-Chr13 18253971 18258840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02413 34 421 AP2-EREBP Transcription Factor Family AT2G41710 64.216 6.05e-164 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g02413 AP2 2.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02413 K09285 - gmx:100786651 674.855