Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02402 ATGAACCTTCAGGAATTAATTCTTTCTGGAAATAGCCTCATTGGTGGTATTCCAATTTCAATTATGAGTTGCAAGAGTCTTACCAAGCTTGATATAAGCAATAACAGATTCAATGGCACAATACCAAGTGAAATCTGCAATATCTCTAGATTGCAGTACTTGCTCTTGAGTCAGAATTCATTGAGAGGGGAGATTCCTCATCAAATTGGAAATTGTGCAAAACTTCTTGAGTTGCAACTGGGTAGTAACTATTTGACTGGAGCTATTCCTTTTGAAATTGGTCACATCAGGAACTTACAGATTGCTTTAAATTTGAGCTTCAATCATCTTCACGGACCGCTGCCCCCTGAACTGGGAAGACTGGACAAGCTTGTTTCACTGGATGTTTCCAACAATCGGCTCTCGGGCAACATCCCACCTGAGCTTAAGGGCATGATGAGCTTGATAGAGGTTAACTTCTCAAATAATCTGCTCAGTGGTCCAGTACCTACGTTTGTACCATTCCAGAAAAGTCCCAATTCAAGTTTTTTGGGCAATAAAGGGCTTTGTGGGGAGCCATTAAACTCTTCATGCGGGGGCCTTTATGATGACCACAAGAATTACCATCACAGGGTTTCTTACCGAATCATACTAGCTGTAATTGGTTCTGGTCTGGCTGTTTTTACGTCAGTAACTTTGGTTGTTTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGTAGCCAAAGATGCTGGAATTGCAGACGATGAAACCAATAACAAACCCACTATAATATCAGGGACTGTTTTTGTTGAGAATCTAAGACAAGCAGTAGATCTTGATGCCGTTGTTAAAGCAACACTGAAAGATTCTAATAAGCTTAGCAGTGGAACTTTCAGCACGGTCTACAAGGCAGACATGCCTTCTGGAATGAGCTTATCTGTAAGGAGACTCAAGTCAATGGACAAGACAATAATTCACCACCAGAACAAGATGATTAGAGAACTTGAAAGGCTGAGCAGACTCTCTCATGAAAATCTAGTGCGGCCAATTGGTTATGTTATTTATGAAGATGTTGCACTTCTCTTGCATCATTATTTACCCAATGGAACATTATCTCAGTTCCTTCATGAATCTaccaagaaaattgaatataaaccTGACTGGCCTACTAGACTGTCCATTGCCATTGGAGTGGCTGAAGGTTTGGCTTTTCTTCATCACGTGGCAATTATCCATCTTGACATTTCTTCTGGAAATGTTCTTTTGGATGCAAATTTTAAGCCTTTGGTTGGGGAGATCGAGATATCAAAACTTCTGGATCCAACCAAAGGCACTGGAAGTATCAGTGCAGTTGCTGGTTCCTTTGGTTACATACCCCCAGAGTACGCATATACAATGCAAGTTACAGCACCAGGAAATGTTTATAGCTATGGTGTTGTTCTGCTTGAGATACTTACAACTCGACCGCCGGTTGATGAGGCTTTTGGTGAAGGGATAGATTTGGTGAAGTGGGTTCACAGTGCTCCGGTGAGAGGAGAAACTCCAGAGCAGATACTGGATGCGAGGCTCAGCACAGTCTCCTTTGGATGGAGGAAAGAAATGCTTGCTGCTCTAAAGGTTGCATTGCTCTGCACAGACAATACGCCAGCAAAACGaccaaaaatgaagaaggtAGTAGAAATGCTTCAAGAAATAAGGCAAAACTG 1688 0.4094 MNLQELILSGNSLIGGIPISIMSCKSLTKLDISNNRFNGTIPSEICNISRLQYLLLSQNSLRGEIPHQIGNCAKLLELQLGSNYLTGAIPFEIGHIRNLQIALNLSFNHLHGPLPPELGRLDKLVSLDVSNNRLSGNIPPELKGMMSLIEVNFSNNLLSGPVPTFVPFQKSPNSSFLGNKGLCGEPLNSSCGGLYDDHKNYHHRVSYRIILAVIGSGLAVFTSVTLVVLLFMIRERQEKVAKDAGIADDETNNKPTIISGTVFVENLRQAVDLDAVVKATLKDSNKLSSGTFSTVYKADMPSGMSLSVRRLKSMDKTIIHHQNKMIRELERLSRLSHENLVRPIGYVIYEDVALLLHHYLPNGTLSQFLHESTKKIEYKPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTKGTGSISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEAFGEGIDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKKVVEMLQEIRQN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02402 562 Gene3D Phosphorylase Kinase; domain 1 245 359 - -
Bva13g02402 562 CDD STKc_IRAK 287 559 - -
Bva13g02402 562 Gene3D Ribonuclease Inhibitor 1 199 IPR032675 -
Bva13g02402 562 Pfam Protein tyrosine and serine/threonine kinase 284 556 IPR001245 GO:0004672|GO:0006468
Bva13g02402 562 ProSitePatterns Tyrosine protein kinases specific active-site signature. 404 416 IPR008266 GO:0004672|GO:0006468
Bva13g02402 562 ProSiteProfiles Protein kinase domain profile. 281 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02402 562 Pfam Leucine rich repeat 2 61 IPR001611 GO:0005515
Bva13g02402 562 SUPERFAMILY L domain-like 2 187 - -
Bva13g02402 562 SUPERFAMILY Protein kinase-like (PK-like) 280 559 IPR011009 -
Bva13g02402 562 Gene3D Transferase(Phosphotransferase) domain 1 360 562 - -
Bva13g02402 562 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 1 559 - -
Bva13g02402 562 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02402 Bva-Chr13 18162908 18166935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02402 1 561 Receptor kinase-like Gene Family AT2G41820 77.087 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g02402 PK_Tyr_Ser-Thr 1.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02402 - - gmx:100805933 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02402 13 18162908 18166935 Bva13g02402 13 18162908 18166935 ECH