Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02369 ATGGAGACCGATAATGGTGACACCAAGTCTAAGATGGAGGACTATGAAGTAATAGAGCAAATTGGTAGGGGAGCATTCGGCTCAGCTTTTCTCGTTCTCCACAAGTCTGAGAAAAGAAGGTATGTGCTGAAGAAGATTCGGTTGGCCAAGCAAACTGAGAAGTTCAAACGTACAGCGCATCAGGAGATGAACCTGATCGCGAAACTAAATAACCCATATATTGTGGAGTACAAAGATGCTTGGGTTGAGAAGGGAGACCATATATGCATTATAACTGGCTATTGTGAAGGAGGTGACATGGCTGAGAACATAAAGAAAGCCCGAGGATCTTTTTTTCCTGAGGAGAAGCTCTGCAAATGGTTGACTCAGTTGTTGATAGCCGTGGATTACGTGCACTCCAATCGCGTAATCCACAGAGATCTTAAGTGTTCCAACATATTTCTCACCAAAGACAATGACATCCGGCTTGGTGACTTTGGTCTTGCAAAGCTACTTAATACGGAAGATCTTGCTTCCTCGGTTGTTGGAACTCCAAACTACATGTGTCCTGAGCTCCTTGCAGATATACCTTATGGCTATAAATCTGACATATGGTCTCTCGGTTGCTGCATGTTTGAAATTGCTGCTCATCAACCGGCATTTCGTGCTCCGGATATGGCTGGacttatcaataaaataaatagatccTCCATTTCTCCGCTGCCCATTGTTTATTCTTCCACGCTGAAACAGATTATCAAAAGCATGCTAAGGAAGAACCCAGAACATAGACCAACAGCAGCAGAACTGTTAAGGCATCCTCATTTACAGCCATATGTTCTACGCTGCCGTAATGCATCATCTAATGTTCTTCCAGTATATCCCCTAGTTAACTCGAAGGATAAAACAAGAAGATCTAACAGATATGGTGGTGGCAAAGTTCATAGGGACAAAGGAGTGGGATTAGTAAATCATTTGGAACGGGTTCATTCATTTGACAGAAATGGAAATGTACAGCCTAGCGATTCCTCTAACGATGACAGGCTAACAGTATCAAGCAGTGCAGAAGACAATCTTGAGACCAAGATGGTTGATCCCGTCAGTTTCATAGTAGAATCATCTACTAGTATGTCTGGCTCAAAAGATGGATCAACAACATCTGAATCAACCAGTTGCAGTGTGTCCAAAGAAACAGACATTAAAAGAAGATCTGCAGGGGAAACAGTTGACAACGAGATTACGTCAAGAAGTACACCAGATTTTGAGCACGGAGGACAAGGAGGATTTGCTGCTGAACAGTTTCAAAAATCAGAAGTGGTTGACATAGTAAATGCAGTGAAAAACACTAAAGTTGAAGATGCTTTGTCcgataaatattttgacaaaGCTGAAGCTCAGAGGGAAGATTCCAAATCTGAGGACTCCAGAAAATCAATAACATCCAGTGCAGGCAACGCTGATAAGGATGGGTCACTTGATGAGGAAAGTTCACCAACTAAGCCTATTAGGGTTGAACATGACATTGAATCTGTAAGTtgcttaaagaaaaatgaaaattctgaTGGATTTACCGAAGGCTCTAAGACTGGCCCTATGTCTTCTGCCAGTGCAGACAGCACTAGTAAGGATGGGTCTCTTGATGAGGAAAGGTCAGCACCAGTTATGCAGCCTATCAGAGTTGAAAATAACGTTGAATCTGTAAGCCCCtcaaagaaaatgggaaatcCTGGTGGGTTTACGGAAAGCTCTTACTTGGACCCTATATCTTCTGCGAGTAATGGTAAAGTTCCAGAAAGCATTGCTAAAACACATGACAGCAGTTGCTCCacgcaaaaagaaaattatagtgCTGGTGTTGCTGATCAGGGACCAAGTGACAATTCTCTGAGCACACTTAGGTCAGTAATCAGTGATGCAACCAAGAATGTGTTGGATGGTCCAGGCCACCAAAGAGCTGACGCACTGGAATCTCTGCTTGAGTTATGTGCTCAACTACTTAAGCAAGACAAACTTGAAGAGCTTGCCGGTGTTCTAAAACCATTTGGGGGAGAAGCTGTATCATCTAGAGAAACGGCAATATGGTTGACAAAGAGCCTTATGCGtgctcaaaaatttaatacagaAACTTA 2108 0.4084 METDNGDTKSKMEDYEVIEQIGRGAFGSAFLVLHKSEKRRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVEYKDAWVEKGDHICIITGYCEGGDMAENIKKARGSFFPEEKLCKWLTQLLIAVDYVHSNRVIHRDLKCSNIFLTKDNDIRLGDFGLAKLLNTEDLASSVVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSTLKQIIKSMLRKNPEHRPTAAELLRHPHLQPYVLRCRNASSNVLPVYPLVNSKDKTRRSNRYGGGKVHRDKGVGLVNHLERVHSFDRNGNVQPSDSSNDDRLTVSSSAEDNLETKMVDPVSFIVESSTSMSGSKDGSTTSESTSCSVSKETDIKRRSAGETVDNEITSRSTPDFEHGGQGGFAAEQFQKSEVVDIVNAVKNTKVEDALSDKYFDKAEAQREDSKSEDSRKSITSSAGNADKDGSLDEESSPTKPIRVEHDIESVSCLKKNENSDGFTEGSKTGPMSSASADSTSKDGSLDEERSAPVMQPIRVENNVESVSPSKKMGNPGGFTESSYLDPISSASNGKVPESIAKTHDSSCSTQKENYSAGVADQGPSDNSLSTLRSVISDATKNVLDGPGHQRADALESLLELCAQLLKQDKLEELAGVLKPFGGEAVSSRETAIWLTKSLMRAQKFNTET 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02369 702 MobiDBLite consensus disorder prediction 366 387 - -
Bva13g02369 702 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bva13g02369 702 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 9 490 - -
Bva13g02369 702 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 539 684 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 481 507 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 327 351 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 294 351 - -
Bva13g02369 702 SUPERFAMILY Protein kinase-like (PK-like) 12 301 IPR011009 -
Bva13g02369 702 CDD STKc_Nek 14 269 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 554 623 - -
Bva13g02369 702 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 9 490 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 366 420 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 388 402 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 294 325 - -
Bva13g02369 702 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02369 702 MobiDBLite consensus disorder prediction 508 534 - -
Bva13g02369 702 MobiDBLite consensus disorder prediction 456 623 - -
Bva13g02369 702 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02369 702 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 539 684 - -
Bva13g02369 702 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02369 702 Gene3D Transferase(Phosphotransferase) domain 1 95 282 - -
Bva13g02369 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Bva13g02369 702 Gene3D Phosphorylase Kinase; domain 1 2 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02369 Bva-Chr13 17971874 17976965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02369 9 270 MAP Kinase Kinase Kinase AT3G13530 32.830 4.48e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bva13g02369 Pkinase 2.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02369 K08857 - gmx:100793379 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02210 04 21170378 21175978 Bva13g02369 13 17971874 17976965 BWGD
Bva13g02369 13 17971874 17976965 Bva13g02369 13 17971874 17976965 ECH