Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02368 ATGGCGAAGAAGAAATCTAGGTTTTCCAATGAAGATGCATATAAAGCAGAACAAGAAGCGGAGCATCAGAATCGCAATCAAAATTCCTCCGAGGAAAAGAGCCTTTACGAGGTTCTTGGTGTGGAGAGAACAGCTTCTCAACaggaaataaagaaagcatACCACAAGTTGGCCCTACGGCTCCATCCGGATAAGAATCCTGGTGATGAGGAAGCTAAAGAGAAATTTCAGCAATTGCAAAAAGTGATCTCAATTCTTGGGGATGAGGAGAAACGGGCTCTTTATGATCAGACTGGTTGTATTGATGATGCTGATCTTGCTGGGGATATTGTTCAGAATCTTCGTGACTTTTTCAGAACAATGTACAAGaagGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGAGGATCTGGCTGTgagaaaaatgatttattatctCTGTACAAGGAGTACAAGGGTAAGATGAACAGGCTGTTCTGTTCAATGCTTTGTTCTGATCCTAAACTTGACTCGCACCGTTTCAAGGATATCATTGATGAAGCTATTGCTGCTGGAGAATTGAAGGCGACAAAAGCCTACCAGAAATGGGCAAAGCAAGTATCTGAAACCAAACCACCTACTAGTCCTTTAAGGAGGGCAAAGTCAAATAAGGAATCAGAAACAGGTTTGTTTGCAATCATATCGCTACGCCAAAAGGAGAGGAAAGACCGAATTGAATCTATGTTCTCATCTCTAATTTCCAAATATGGTGGAGGCGATATGCCCGAACCCTCAGAAGAAGAGTTTGAAGCTGCACAGAGAAAGCTAGAAAGCCGAAAGCCCGCTAAAAGGCAAAGGCGGAAGTA 854 0.4098 MAKKKSRFSNEDAYKAEQEAEHQNRNQNSSEEKSLYEVLGVERTASQQEIKKAYHKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCIDDADLAGDIVQNLRDFFRTMYKKVTEADIEEFEANYRGSGCEKNDLLSLYKEYKGKMNRLFCSMLCSDPKLDSHRFKDIIDEAIAAGELKATKAYQKWAKQVSETKPPTSPLRRAKSNKESETGLFAIISLRQKERKDRIESMFSSLISKYGGGDMPEPSEEEFEAAQRKLESRKPAKRQRRK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02368 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 284 IPR042977 -
Bva13g02368 284 Pfam DnaJ domain 35 96 IPR001623 -
Bva13g02368 284 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 284 - -
Bva13g02368 284 SUPERFAMILY Chaperone J-domain 29 116 IPR036869 -
Bva13g02368 284 MobiDBLite consensus disorder prediction 252 284 - -
Bva13g02368 284 MobiDBLite consensus disorder prediction 1 28 - -
Bva13g02368 284 SMART dnaj_3 33 91 IPR001623 -
Bva13g02368 284 PRINTS DnaJ domain signature 71 91 IPR001623 -
Bva13g02368 284 PRINTS DnaJ domain signature 54 69 IPR001623 -
Bva13g02368 284 PRINTS DnaJ domain signature 91 110 IPR001623 -
Bva13g02368 284 PRINTS DnaJ domain signature 36 54 IPR001623 -
Bva13g02368 284 ProSiteProfiles dnaJ domain profile. 34 99 IPR001623 -
Bva13g02368 284 MobiDBLite consensus disorder prediction 201 220 - -
Bva13g02368 284 CDD DnaJ 36 88 IPR001623 -
Bva13g02368 284 Gene3D DnaJ domain 17 107 IPR036869 -
Bva13g02368 284 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02368 Bva-Chr13 17966523 17970717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02368 30 96 C2H2 Transcription Factor Family AT1G74250 40.278 3.40e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02368 K09529 - vvi:100265910 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02211 04 21177151 21180648 Bva13g02368 13 17966523 17970717 BWGD
Bva13g02368 13 17966523 17970717 Bva13g02368 13 17966523 17970717 ECH