Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02367 ATGGAGTCTCATGATGAGACAGGATGCCAGGCTCCAGAGCGTCCCATCCTTTGCGTCAATAATTGTGGTTTCTTTGGAAGGGCTGCTAACATGAATATGTGTTCCAAATGTTATAAGGACATGCTGTTGAAGCAGGAACAGGAGAAACTTGCAGCATCATCTGTTGAAAACATTGTGAATGGCAGCTCTAACAACATTGAGAAAGAAGCTGTAACTGCAATTGCCACGGATCTACAAGTTGAAACTGTCGAAGTAAAGACGGTCCATGCCGAAATTTCTGGGGACTCATCCTCTAGTCAGTGtttggaaataaaaaccaaGACTGGTCCTAGCAGATGTGCCACTTGCCGGAAGCGTGTTGGTTTAACTGGTTTCAGCTGCAAATGTGGAAACCTCTTTTGCACAATGCATCGCTATTCTGATAAACATGATTGCCCTTTCGATTATCGGACTGCTGGACAGGATGCTATAGCTAAAGCGAACCCTTTAGTTAAGGCAGAAAAGCTTGACAAAATCTA 518 0.4286 MESHDETGCQAPERPILCVNNCGFFGRAANMNMCSKCYKDMLLKQEQEKLAASSVENIVNGSSNNIEKEAVTAIATDLQVETVEVKTVHAEISGDSSSSQCLEIKTKTGPSRCATCRKRVGLTGFSCKCGNLFCTMHRYSDKHDCPFDYRTAGQDAIAKANPLVKAEKLDKI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02367 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Bva13g02367 172 SUPERFAMILY AN1-like Zinc finger 105 167 IPR035896 -
Bva13g02367 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Bva13g02367 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 56 - -
Bva13g02367 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Bva13g02367 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Bva13g02367 172 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 2 172 - -
Bva13g02367 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 172 - -
Bva13g02367 172 Gene3D - 1 64 - -
Bva13g02367 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Bva13g02367 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Bva13g02367 172 Gene3D - 88 168 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02367 Bva-Chr13 17963582 17965492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02367 5 172 C2H2 Transcription Factor Family AT3G52800 44.379 6.27e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02367 - - gmx:100499995 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02367 13 17963582 17965492 Bva13g02367 13 17963582 17965492 ECH
Bva13g02367 13 17963582 17965492 Bva09g00073 09 348872 351576 ECH
Bva13g02367 13 17963582 17965492 Bva07g02564 07 20332662 20336245 ECH