Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02366 ATGGCTACTACACTGTGTACATACCTATTCCTTCTCTCTGTAACTGCAAGCTTTACATTTCTGAATCTTTGCTCATGTTCATCAGAGGCTGAGATTCTGCTTTCCTTCAAGGCCTCCATTGAAGACACTAGGAAGTCTCTTGCAAGCTGGTCCAATACTTCAGCGACCCACTACTGTAACTGGACTGGAATCACCTGCACCACAGCATCTGTTACTTCCATTAACCTTCAAAGCTTTAACCTTTCTGGGGATATCTCATCTTCAATATGTGACCTTCCAAATCTGACTGAACTCAATCTTGCAGATAATCTATTCAACCAGCCCATCCCTCTGCATCTTTCTCAGTGCAGTTCGTTGCAAGTTTTGAATCTCAGTAACAATCTTATCTGGGGCACTATCCCGTCTCAGATTTCTCAGTTTGGTTCCTTGAGAGTGCTTGATTTAAGCAGAAACCACATAGAGGGGAATATCCCAGAGAGCTTAGGCTCATTGAAGAACCTTCAGGTCCTCAACGTGGGAAGCAACTTGTTATCAGGTAGTGTACCTAGTATTTTTAGGAATTTCACTAAGCTTGCTGTGCTTGATTTGTCTCAAAATAAGTACTTGGTGAGTGAGATTCCTAAGGATGTTGGGGAACTTGAAAATCTCGAACAGCTACTGTTGCAGAGCTCTGGTTTTCAAGGTGAAATTCCTGATTCTTTTGGGAATCTGCTAAGTTTGACCCATTTAGACCTCTCCGAGAACAATCTAACCGGTATGGTTCCTCTTGCTTTGGTGTCTTCTCTGAAGAACCTGGTCTCTTTTGATGTTTCTCAAAACAAGCTCTTGGGGCCATTTCCAAATGGCATTTGTAAAGGACAAGGCCTTATAAACCTGAGTCTCCATACAAATGGCTTCAATGGTTCCATATCCAACTCCATTAGTGAATGTAAGAATCTTGAGAGATTTCAAGTTCAGAACAATGGGTTTTCTGGAGACTTCCCAGATGTATTATGGTCATTACCCAAAATTAAGCTCATCAGAGCTGAAAACAATAGATTCTCGGGACAAATACCTGAGTCAATATCAGGAGCTGTTCAGTTGGAGCAAATTCAACTTGACGGTAACGAGTTTGCGGGGAAAATTCCTCAAAGTCTTGGGTTGCTCAAGAGCTTATATAGATTCTCTGCGTCTCTCAATCGTTTGTCTGGTGAAATCCCTCCAAATTTTTGTGATTCCCCTGTTATGAGTATAGTGAATCTTTCCCACAATTCACTTTCTGGTAAAATCCCAGAGCTGAAGAAATGCCGGAAACTAGTTTCATTGTCTTTGGCGGACAACCGTCTTAATGGAGAAATACCCCCATCCCTTGCTGAGCTACCAGTGCTAACTTACCTTGATCTTTCAGATAACAGTCTCACTGGCTCAATCCCTCAAGGGCTTCAAAACTTGAAGCTTGCTCTTTTCAATGTTTCCTTCAATCAGCTATCTGGTAGAGTACCTTATTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCACAACTTTGTGGCCCTGGATTACCCACTTCCTGTTCTGATGACCCGCCAAGACACCACAACGCTGCTCTTACAACTTTAACATGTGTCTTGATATCTCTAGCCTTTCTTGTTGGAGCTGCCATTGTTGCTGCTGGATTTGCAATGTACCGGAGGAGGTCTCTCAAGCAAAATCAAATAGGGGTTTGGCGCTCAGTGTTCTTCTATCCTCTAAGAATTTCTGAGCATGACCTGCTTATGGGGATGGATGAGAAAAGCTCGAAAGGGAATGGTGGTGTGTTTGGCAAAGTTTATGTTGTAAGTTTACCTAGTGGTGAATTAGTTGCTGTGAAAAAGATACTGAATTTTGGGAACCAGTCTTCAAAAAGTCTGAAACTTGAGGTCAAGACGTTGGCCAAAATTAGGCATAAGAACATTGTGAAAATTCTGGGGTTTTGCCACTCTGACGAGTCAATTCTTCTCATCTATGAGCACTTGCATGAAGGAAGCTTAGGGGACATGATTTCTCAGCAGAATTTTGAGTTGCAGTGGGGAGTTAGACTAAAGATTGCCATTGGAGTTGCCCAAGGATTAGCATATCTTCACAAGGATTATAATCCCCATTTGCTTCACAGAAATCTCAAGTCAAGCAACATTCTGTTGGATTCCAACTTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAATCGTGGGTGAGGCTTCATTTCAATCAACTCTTGCTTCTGAAGCAGCATCTTCTTGTTATAATGCTCCAGAATATAGTTACAATAAGAAAGCAAGTGAACAACTGGACGTGTACAGCTTTGGTGTTGTGTTGCTAGAGCTAGTGAGTGGGAGGAAGGCAGAGCAGAGAGAGTCAACGGACTCTCTTGACATTGTAAAGTGGGTTAGAAGGAAAGTGAACATCAGTAACGGTGTGCTTCAAGTTCTTGACCCCAAAATATCACATTCTTGTCAGCAACAGATGATTGGAGCTCTGGAAATTGCTCTTCTTTGCACCTCAGTGGTGCCTGAAAAACGACCATCAATGGTAGATGTCGTTAGAGCTCTTCAGTCACTTGAGTCAAAGTTCTACATTGCAAATTCTCAGGGTCCCGATGAGGAACACCAGCTTCCAGTCTG 2651 0.4255 MATTLCTYLFLLSVTASFTFLNLCSCSSEAEILLSFKASIEDTRKSLASWSNTSATHYCNWTGITCTTASVTSINLQSFNLSGDISSSICDLPNLTELNLADNLFNQPIPLHLSQCSSLQVLNLSNNLIWGTIPSQISQFGSLRVLDLSRNHIEGNIPESLGSLKNLQVLNVGSNLLSGSVPSIFRNFTKLAVLDLSQNKYLVSEIPKDVGELENLEQLLLQSSGFQGEIPDSFGNLLSLTHLDLSENNLTGMVPLALVSSLKNLVSFDVSQNKLLGPFPNGICKGQGLINLSLHTNGFNGSISNSISECKNLERFQVQNNGFSGDFPDVLWSLPKIKLIRAENNRFSGQIPESISGAVQLEQIQLDGNEFAGKIPQSLGLLKSLYRFSASLNRLSGEIPPNFCDSPVMSIVNLSHNSLSGKIPELKKCRKLVSLSLADNRLNGEIPPSLAELPVLTYLDLSDNSLTGSIPQGLQNLKLALFNVSFNQLSGRVPYSLISGLPASFLEGNPQLCGPGLPTSCSDDPPRHHNAALTTLTCVLISLAFLVGAAIVAAGFAMYRRRSLKQNQIGVWRSVFFYPLRISEHDLLMGMDEKSSKGNGGVFGKVYVVSLPSGELVAVKKILNFGNQSSKSLKLEVKTLAKIRHKNIVKILGFCHSDESILLIYEHLHEGSLGDMISQQNFELQWGVRLKIAIGVAQGLAYLHKDYNPHLLHRNLKSSNILLDSNFEPKLTDFALDRIVGEASFQSTLASEAASSCYNAPEYSYNKKASEQLDVYSFGVVLLELVSGRKAEQRESTDSLDIVKWVRRKVNISNGVLQVLDPKISHSCQQQMIGALEIALLCTSVVPEKRPSMVDVVRALQSLESKFYIANSQGPDEEHQLPV 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02366 883 SMART LRR_typ_2 92 116 IPR003591 -
Bva13g02366 883 SMART LRR_typ_2 237 260 IPR003591 -
Bva13g02366 883 SMART LRR_typ_2 140 163 IPR003591 -
Bva13g02366 883 SMART LRR_typ_2 164 187 IPR003591 -
Bva13g02366 883 SMART LRR_typ_2 453 476 IPR003591 -
Bva13g02366 883 SMART LRR_typ_2 262 286 IPR003591 -
Bva13g02366 883 SMART LRR_typ_2 188 213 IPR003591 -
Bva13g02366 883 Pfam Protein kinase domain 601 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02366 883 Gene3D Ribonuclease Inhibitor 285 401 IPR032675 -
Bva13g02366 883 ProSiteProfiles Leucine-rich repeat profile. 142 165 IPR001611 GO:0005515
Bva13g02366 883 Gene3D Ribonuclease Inhibitor 402 522 IPR032675 -
Bva13g02366 883 Gene3D Ribonuclease Inhibitor 182 284 IPR032675 -
Bva13g02366 883 SUPERFAMILY L domain-like 27 300 - -
Bva13g02366 883 Pfam Leucine Rich Repeat 456 477 IPR001611 GO:0005515
Bva13g02366 883 ProSiteProfiles Leucine-rich repeat profile. 239 260 IPR001611 GO:0005515
Bva13g02366 883 PANTHER - 7 870 - -
Bva13g02366 883 Gene3D Transferase(Phosphotransferase) domain 1 668 878 - -
Bva13g02366 883 Gene3D Phosphorylase Kinase; domain 1 586 667 - -
Bva13g02366 883 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 870 - -
Bva13g02366 883 PRINTS Leucine-rich repeat signature 240 253 - -
Bva13g02366 883 PRINTS Leucine-rich repeat signature 453 466 - -
Bva13g02366 883 SUPERFAMILY Protein kinase-like (PK-like) 600 860 IPR011009 -
Bva13g02366 883 SUPERFAMILY L domain-like 204 519 - -
Bva13g02366 883 Pfam Leucine rich repeat 215 275 IPR001611 GO:0005515
Bva13g02366 883 Pfam Leucine rich repeat 142 200 IPR001611 GO:0005515
Bva13g02366 883 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Bva13g02366 883 ProSiteProfiles Protein kinase domain profile. 592 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02366 883 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02366 Bva-Chr13 17955961 17959015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02366 33 863 Receptor kinase-like Gene Family AT5G06940 63.886 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g02366 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02366 - - gmx:100794428 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02366 13 17955961 17959015 Bva13g02366 13 17955961 17959015 ECH