Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02356 ATGCTGCTTCCATTTCTCATTTGCTGCCTCTTTGTTCCTgtcactttctctctcaacTCCGACGGGCTCTCTCTCCTCGCACTTAAAGCTGCCATAGAATCCGACCCAAGTGGAGTTCTCAAGTCGTGGTCCGATTCCGACTCCACCCCTTGTCGGTGGCCCGGTGTGGTCTGCTCCCACGATCGAGTCACCCAAGTCTCCCTCTCAAACAAAGCCTTAACTGGCTACATTCCCTCTGAACTCGGTTTGCTCGACTCTCTTAAGAGACTCGGTCTTTCTCACAACAACTTATCCAAAACCATTCCTTCTCGTCTTTTCAGTGCCACCAATTTAGTTGTTCTGGACCTCTCTCACAACTCCCTCACTGGCCCAATCCCACCAGAAATTAAATCTCTCCAATCGCTTAGGCATTTAGATTTATCCTCAAATTTGCTCAATGGGTCTCTTCCTGAAGCTCTCTCCGATCTTATGAACCTCGTCGGGACCTTGAACCTTTCTAACAATTACTTCTCCGGAGGCGTCCCAGAGTCTTTCGGGAAACTCCCTGTGATAGTGAGTTTGGATCTCCAGAACAACAATCTCGCCGGAAAAATTCCTCAGGTGGGTTCACTGCTAAACCAGGGCCCAACAGCTTTCTCGGGAAACCCCGGCCTTTGTGGGTTTCCTTTGCAGAATGCATGCCCCGAAGCTCAAAACCCTGAGATTTTCAGAAGCACCCAAGACCCTCAAAATCCCCAAACACTTAATCCTGGCTTCCCCGAAGGTCAAGACGCGAAGGCGAAGGATAGAGGCGTATCTGTGATTTTCCCTATAATTTCCGGCGTTTCGCTTGTGGTTGGGGTCGTTTCTTTGTCAGTGTGGCTGATCCGGAGAAGATGGACGATTGACGAGGGCAAattaggaaaacaaaaattagataatGAGGTAGACGAGGAGGACGGAGAAGGGCAAAAGGGTAAATTCGTGGTGTTCGATGAAGGGTTTAATATGGAATTAGAAGATTTATTAAGGGCATCTGCCTATGTTGTGGGGAAAAGCAGGAGCGGAATCGTGTACAAGGTGGTCGTTGTTGGGAAGGGATCGTGCCCGGTGCCAACAGTCGTGGCCGTGAGGCGGTTGAGCGAGGGTGATGCCACGTGGCGGCTGAAGGAGTTTGAATCCGAGGTGGAGGCCATTGGGAGGGTCCACCACGCCAACATTGTCCCATTAAGAGCATATTACTACGCAAACGATGAGAAGCTGCTCATCACTGATTTCATCCGCAATGGAAGCTTGCACACTGCACTCCATGGTGGTCCTTCTAGTTGTTTGCCACCATTGTCGTGGGCTGCGAGGTTAAAAATTGCTCAAGGAGTTGCTAGAGGTTTAATGTACATACACGAGTTGAGTGGTCGCAAATACATCCATGGCAACCTGAAATCAACAAAAGTCTTGCTGGATGATGATCTCCAACCTTTGATATCCGGTTTTGGGCTTACACGCCTTGGTCTGGGCAGCAGCACTAAAAGACGGAACGCAAACCAGAGTATTGTAACCTCTGCAATTGGTTCAAAGATTGCAGCTTCTTCTAACTGCTACTTGGCTCCCGAGGTGCGCATGGCTGGTGGAAAGTTCACTCAGAAATGTGATGTGTATTCTTTTGGAATAGTGCTGTTGGAACTTTTAACGGGTCGGGTGCCGGATTCAGGGACAGAAAACGATGGGAAGGTGCTCCAGAGTTTTGTGAGGGAAGCATTCAGGGAGGAGAAGCCCCTGTCTGAGGTTATAGACTCGGCACTTCTACCTGAGGTTCATGCTAAGAAACAAGTCGTTGCAGCATTTCACATTGCTCTCAACTGCACAGAACTTGACCCAGAATTGCGACCCAGGATGAGAGCTGTGTCCGAGAGCCTTGACCGCATCAAAATGCATTGTGCCGATGATGAAACACTGTA 1934 0.485 MLLPFLICCLFVPVTFSLNSDGLSLLALKAAIESDPSGVLKSWSDSDSTPCRWPGVVCSHDRVTQVSLSNKALTGYIPSELGLLDSLKRLGLSHNNLSKTIPSRLFSATNLVVLDLSHNSLTGPIPPEIKSLQSLRHLDLSSNLLNGSLPEALSDLMNLVGTLNLSNNYFSGGVPESFGKLPVIVSLDLQNNNLAGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAQNPEIFRSTQDPQNPQTLNPGFPEGQDAKAKDRGVSVIFPIISGVSLVVGVVSLSVWLIRRRWTIDEGKLGKQKLDNEVDEEDGEGQKGKFVVFDEGFNMELEDLLRASAYVVGKSRSGIVYKVVVVGKGSCPVPTVVAVRRLSEGDATWRLKEFESEVEAIGRVHHANIVPLRAYYYANDEKLLITDFIRNGSLHTALHGGPSSCLPPLSWAARLKIAQGVARGLMYIHELSGRKYIHGNLKSTKVLLDDDLQPLISGFGLTRLGLGSSTKRRNANQSIVTSAIGSKIAASSNCYLAPEVRMAGGKFTQKCDVYSFGIVLLELLTGRVPDSGTENDGKVLQSFVREAFREEKPLSEVIDSALLPEVHAKKQVVAAFHIALNCTELDPELRPRMRAVSESLDRIKMHCADDETL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02356 644 SUPERFAMILY L domain-like 20 224 - -
Bva13g02356 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 636 - -
Bva13g02356 644 Gene3D Phosphorylase Kinase; domain 1 317 419 - -
Bva13g02356 644 Pfam Protein tyrosine and serine/threonine kinase 343 631 IPR001245 GO:0004672|GO:0006468
Bva13g02356 644 ProSiteProfiles Protein kinase domain profile. 337 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02356 644 MobiDBLite consensus disorder prediction 237 257 - -
Bva13g02356 644 Gene3D Ribonuclease Inhibitor 161 229 IPR032675 -
Bva13g02356 644 Gene3D Ribonuclease Inhibitor 18 160 IPR032675 -
Bva13g02356 644 Pfam Leucine rich repeat N-terminal domain 19 59 IPR013210 -
Bva13g02356 644 Gene3D Transferase(Phosphotransferase) domain 1 420 643 - -
Bva13g02356 644 PRINTS Leucine-rich repeat signature 111 124 - -
Bva13g02356 644 PRINTS Leucine-rich repeat signature 132 145 - -
Bva13g02356 644 SUPERFAMILY Protein kinase-like (PK-like) 342 637 IPR011009 -
Bva13g02356 644 Pfam Leucine rich repeat 86 145 IPR001611 GO:0005515
Bva13g02356 644 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 8 636 - -
Bva13g02356 644 SMART LRR_typ_2 84 108 IPR003591 -
Bva13g02356 644 SMART LRR_typ_2 132 156 IPR003591 -
Bva13g02356 644 MobiDBLite consensus disorder prediction 237 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02356 Bva-Chr13 17906806 17908140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02356 18 635 Receptor kinase-like Gene Family AT3G57830 61.371 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva13g02356 PK_Tyr_Ser-Thr 3.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02356 - - gmx:100796011 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02356 13 17906806 17908140 Bva13g02356 13 17906806 17908140 ECH