Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02345 ATGGGGTTCTCGAGAGCTATCTGGGAAGAACAATTAGAAGAAGAGCGAGAGACAAAGTTTCTGGTGTCCTCTTTCATGGCTTCCACTGTTAAGAGCTCCAACCAAACAAATACTCAGCTGGAACCAACCCCAATAGCATCTCATCgccatcatcatcttcttcaacaacaacaacagcagcagcagcatcaCATACAAGAGcaccaaatttcttttggaatgATGCAATCATCTTCGTCATCTTCCTTGCCCGGACACTACCTAAGCAAGGATTCTGGAGCTTATGAATTAGGAGAACTGGATCAAgctctctttctttatctgGATGGACAAACAGCAGACCCTTCCAAATTTCAAGACCAACGACATAACTCATCATCGTCAGGAATGAGGCCTCCGACACTCAACATTTTCCCATCTCAGCCTATGCACGTAGAGCCACCATCATCCaagGCTAGCATGGAGTTAGTTTCGCCACAAAGCAGTGGTTCCAAGAGACCATCAGAACCATCGGCCAACCAGCGGAATGAAGCCGCCTCTGCGCCTGAACCGGCCAAATCTGTCAagCAGCGAGAGAGCAAGCGCAAGGGTCCAACGTCAAGTTCAGAACAGGAAGGACCAAAAACACCTGACCCGAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCGTATGTTCAACAGCTAGAGTCAAGTAGGATTAGGCTTAATCAGCTGGAACAAGAGCTACAGCGTACTAGAGCTCAAGGCGTATTTTTTGGAGGTGGTGCACTAACGGGAGGAGAGCAAGGCCTTCCTGTCGCCATGAGCAGCATTACCCCAGAAGCTGCTATGTTCGACGTTGAATATGCAAGGTGGCTAGAGGAGCACCATCGTCTGGTGTGCGAGCTAAGAGCCGCAGTTCAAGAGCATCTACCTGAGAATGAGCTTAGGCTATTTGTTGACAACTGCTTGGCACATTATGACCAAGTAATGAATCTCAAGGGCATTGTGGCCAAAACCGACGTATTCCACCTTGTTTCTGGCATGTGGAAGACTCCAGCTGAACGTTGCTTCATGTGGATCGGTGGATTCAGGCCATCGGAACTCATTAAGATTATTATAAGTCAAATCGAGCCTCTGACAGAGCAACAAATACTGGCTATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGATGCTCTCTCTCAAGGGCTCGAGGCTCTGAACCAATCTCTTTCGGAAACAATAACATCAGACTCTTTGAGCTGTCCTCCTAATATGGCTAACTACATGGGACAAATGGCCGTGGCCATCAACAAGCTCTCTACAATCGAAGGTTTCGTGAGACAGgCAGACAATCTTCGTCACCAGACCATTCATCGTCTGCATCATATCTTAACGACACGTCAAGCAGCAAGGTGTCTGTTGGCAATTGCCGAATACTTCCATCGTCTGCGAGCACTGAGTTCTCTTTGGTTGGCGCGCCCTCGCCAAGAATA 1514 0.4531 MGFSRAIWEEQLEEERETKFLVSSFMASTVKSSNQTNTQLEPTPIASHRHHHLLQQQQQQQQHHIQEHQISFGMMQSSSSSSLPGHYLSKDSGAYELGELDQALFLYLDGQTADPSKFQDQRHNSSSSGMRPPTLNIFPSQPMHVEPPSSKASMELVSPQSSGSKRPSEPSANQRNEAASAPEPAKSVKQRESKRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRTRAQGVFFGGGALTGGEQGLPVAMSSITPEAAMFDVEYARWLEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKGIVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIIISQIEPLTEQQILAICGLQQSTQEAEDALSQGLEALNQSLSETITSDSLSCPPNMANYMGQMAVAINKLSTIEGFVRQADNLRHQTIHRLHHILTTRQAARCLLAIAEYFHRLRALSSLWLARPRQE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02345 504 MobiDBLite consensus disorder prediction 115 135 - -
Bva13g02345 504 Gene3D - 212 260 - -
Bva13g02345 504 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 216 231 IPR004827 GO:0003700|GO:0006355
Bva13g02345 504 SMART brlzneu 209 295 IPR004827 GO:0003700|GO:0006355
Bva13g02345 504 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 211 255 IPR004827 GO:0003700|GO:0006355
Bva13g02345 504 MobiDBLite consensus disorder prediction 153 180 - -
Bva13g02345 504 MobiDBLite consensus disorder prediction 187 201 - -
Bva13g02345 504 CDD bZIP_HBP1b-like 213 265 - -
Bva13g02345 504 Pfam bZIP transcription factor 213 248 IPR004827 GO:0003700|GO:0006355
Bva13g02345 504 SUPERFAMILY Leucine zipper domain 213 256 IPR046347 GO:0003700|GO:0006355
Bva13g02345 504 ProSiteProfiles DOG1 domain profile. 286 500 IPR025422 GO:0006351|GO:0043565
Bva13g02345 504 Pfam Seed dormancy control 304 378 IPR025422 GO:0006351|GO:0043565
Bva13g02345 504 Coils Coil 232 259 - -
Bva13g02345 504 PANTHER TRANSCRIPTION FACTOR TGA9 101 503 - -
Bva13g02345 504 MobiDBLite consensus disorder prediction 115 216 - -
Bva13g02345 504 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 101 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02345 Bva-Chr13 17858387 17864925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02345 85 504 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.414 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva13g02345 DOG1 4.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02345 K14431 - gmx:100815176 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02227 04 21259886 21265170 Bva13g02345 13 17858387 17864925 BWGD
Bva13g02345 13 17858387 17864925 Bva13g02345 13 17858387 17864925 ECH