Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02338 ATGTTCTGTGGTTTAGTGACCTTGAACAACCCACCAATGCTCAAAGGATGGAATGGTAGTGATCCTTGTCAGGAGTCTTGGACGGGGGTAGAATGTTCTGGATCATCGGTTATACACCTTGAAATTCAAGGATTAAACCTCTCTGGTCATCTCGGGGGCCTGCTATATAATCTACAGaatttgaaggaaaaTGATGTCAGCTCCAATAACATTGTGGGTGAAATACCATTTGGCTTACCTCCCAGCGCCACATATATAAACATGGCTTCCAACTTTTTGAGCCAAAATATCCCTCCTTCGTTAACTACCATGAAAAAGCTCCGACATCTGAACTTGAGCCACAACTTCTTATCTGGACCCGTTGGCGATGTATTTTCTGGCCTAAATGATCTCAGAGAGATGGATCTTTCGCACAATAATTTCTCAGGAGATCTACCACATTCATTTGGTTCCTTGTCAAATCTCAGCAAATTGTTCTTGCAGAATAACAGATTTTCTGGATCAGTCACCTACCTAGCTGAACTTCCACTCACAGACTTGAATATTCAATACAATCATTTCAGTGGCATTATTCCACAGCATTTTCAGtccattcaaaatttatgGATTGGAGGGAATAAATTCCATGCATGGGACAACTCTTCTCCCTGGGCTTTCCCTATGGCCAGCGTACCACTTGAGCATAATATTAGTCGTCCACCGACAAATCAATCAAATGCCATTAAGAATCCCTCTCCCAAAGTGACCTTGCACAAGAAACATATGGATCCTGGAGGAATTGCTTTTATGGTTGGTGGAGGAATACTATTGGCAACTGGTTTTGCACTCTTCATTGCAATCCATTTGAATCGACTGCGAGCGCAAAGGCTGAAGAACTTGGAAAGCAGCAATAAATGCTCATTGCAATCTCATCCAACCAGTGCAACCCTAGTCTCTTCTACTGCACTAGGAGAGAGCCCGCGAATTCCGCCTTTTAATTCAGCATCCCTTCTGGGTGCAAAGCGATTACCTCCTGTGCACTATAACAGAAGAGAGGAAACGTCAAGAGGAAGTTTTTCCAAAAAATGCAGATTCCCTCCAAGGATCAAAGTTTACACTCTGGCGGAGCTTCAATTTGCAACAAACAGCTTCAGGGAAGAAAACCTTTTGGGAGAAGGATATATTGGTCCTGTTTACAAAGCTGAGTTTCCAGATGGCCAAATTTTCGCCGTGAAGAATATCAACATGACAGGCCTGTCTTTAAACGAAGGGAAGTTTTTGGATGCTGTTTGTACCGCTTCCCGTCTAAGGCATCCCAACCTCGTAGCGCTCAATGGTTACTGTTTGGAGCACGGACAGCATCTTCTTGTTTACGATTACGTTAGGAATCTAACACTGCACGATGCTCTTCACGGTCAAGTTTACAAGCCTCTTTCGTCTGCCCTGTGTCTCCAGATAGCCCTAGGTGTTTCTCAGGCTTTGGACTATATGCATTCTTTCTCCCCTCCTGTTGCCCATGGCAACTTGAAGGCTGCCAGTATTCTACTCGACGACAATCTGAAGCCTCGCGTCTGTGACTGTGGCCTAGCTATTTTTAGACCGCTGACAAGTAACGGAGACAGAATTAAGGTGAGTCCTTGCCTAATTCTGCAGCTTAATGCTAATGGAGAAACTGGCTACATTGCACCTGACCACGCCCAGCCAGGAATTGGAAGTGGGAACCCGAAGAGTGACATTTTTGCCTATGGTGTGTTGCTTCTGGAACTATTGACAGGAAGGAAACCTTTTGATAATTCCAGGCCAAGGGAGGAGCAACATTTGGTGAAATGGGCTTCGTCCAGGCTTCATGATAATGAGAGCTTAGAACAGATGGTGTTTCCGGGAATTAAAAGGACATTTTCACCAAAGGCTCTCCCGTTATGCAGACATCGTCTCCCTCTGCATTCAGGTATCAGCACGATTTGTTTCAAGAACAACAGATGTGTATTTGAACCGGTGAAGGAATTCCGACCACCAATGTCTGAAGTCGTGGATTCTCTTACAACTTTTTCGCAAAAGCTAAAAGTGGCAAAAATCGAGGTAGCAGAGGTCTA 2072 0.4397 MFCGLVTLNNPPMLKGWNGSDPCQESWTGVECSGSSVIHLEIQGLNLSGHLGGLLYNLQNLKENDVSSNNIVGEIPFGLPPSATYINMASNFLSQNIPPSLTTMKKLRHLNLSHNFLSGPVGDVFSGLNDLREMDLSHNNFSGDLPHSFGSLSNLSKLFLQNNRFSGSVTYLAELPLTDLNIQYNHFSGIIPQHFQSIQNLWIGGNKFHAWDNSSPWAFPMASVPLEHNISRPPTNQSNAIKNPSPKVTLHKKHMDPGGIAFMVGGGILLATGFALFIAIHLNRLRAQRLKNLESSNKCSLQSHPTSATLVSSTALGESPRIPPFNSASLLGAKRLPPVHYNRREETSRGSFSKKCRFPPRIKVYTLAELQFATNSFREENLLGEGYIGPVYKAEFPDGQIFAVKNINMTGLSLNEGKFLDAVCTASRLRHPNLVALNGYCLEHGQHLLVYDYVRNLTLHDALHGQVYKPLSSALCLQIALGVSQALDYMHSFSPPVAHGNLKAASILLDDNLKPRVCDCGLAIFRPLTSNGDRIKVSPCLILQLNANGETGYIAPDHAQPGIGSGNPKSDIFAYGVLLLELLTGRKPFDNSRPREEQHLVKWASSRLHDNESLEQMVFPGIKRTFSPKALPLCRHRLPLHSGISTICFKNNRCVFEPVKEFRPPMSEVVDSLTTFSQKLKVAKIEVAEV 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02338 690 Pfam Protein kinase domain 378 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02338 690 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 7 682 - -
Bva13g02338 690 SUPERFAMILY Protein kinase-like (PK-like) 352 635 IPR011009 -
Bva13g02338 690 SUPERFAMILY L domain-like 12 210 - -
Bva13g02338 690 Gene3D Transferase(Phosphotransferase) domain 1 455 689 - -
Bva13g02338 690 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Bva13g02338 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 682 - -
Bva13g02338 690 Gene3D Phosphorylase Kinase; domain 1 339 453 - -
Bva13g02338 690 Gene3D Ribonuclease Inhibitor 5 231 IPR032675 -
Bva13g02338 690 ProSiteProfiles Protein kinase domain profile. 377 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02338 690 Pfam Leucine rich repeat N-terminal domain 9 33 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02338 Bva-Chr13 17809233 17818623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02338 7 689 Strubbelig Receptor Gene Family AT5G06820 52.168 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bva13g02338 Pkinase 2.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02338 - - cam:101498175 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02235 04 21298859 21304852 Bva13g02338 13 17809233 17818623 BWGD
Bva13g02338 13 17809233 17818623 Bva13g02338 13 17809233 17818623 ECH