Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02334 ATGACCCGCTCACGAAAAATTAGGATACCCTTTAATTTCAAATGGgctatttctaatttttctggaGATCAGCTTGGTTCATCAGAAAACCCACTTTGGCCTGCTCTGTTGTACCGCCTTGCCCAAAACCCCAGAAATCATGCAACAAAAAGAGCAGTGGAATCTTCCCATTGTGACGGTCATGATGTAACTTTGACgactgaaaaggaaaatgctcCAAAATTCTCACCTACCACACTAAAAGAAGCTCAAGCTGCATTACTGGATTATCTACATTACACTAGAAGCTTACAGTTCACGGATGCAGATAATATGGGTAGAAACTCGCCATATTTTCTTGAGGAGCTTCTGGAGAAAGTCGGAAAGGGGGAGGACATCAGGCGATCAATTACCCGGTATTTACGTTACCATCCTATCAATGAATTTGCACCCTTCTTCGAGAGCATTGGTTTAAAACCTTCTGAATATATGCCTTTTCTTCCCCGCGATTTGATGTTTTTATGTGACGATGAACTCTTGCTAGAGAACTACGAGATGTTGTGTAACTATGGGATTCCTCGGAATAAGATAGGAAAGATATATAAGGAAGCAATTCAAGTTTTTCACTATAGTCACGGGGTTTTAGCATCAAAGCTTCAAGCCTATGAAGAACTGGGTATTAGTAAATCTTTTTTAGTAGAAGTTATTGCTTCTAGTCCATATGTTTTGATTGGAGATATCAACCTTGACGTTGTTGAGGTTGTAGAGAAATTGGAGCATTTTGGGAAGGATATTAATTGGGTTGAGGAACATTTGTTGGATGGGACGTCTTATAATTGGGGCCAGGTGCTTGAGCTGTTATGCTTGCTTGGCAAGTTTTCCAGTGAGGAGCAGTTGGGTGAAATAATCAACCAGCAccctgattttctttttgaggatTCAGGAAGTAGGACAATCTCCCTGattgtctttttcttaaaGCTTGGATTATCAATAAACCAGATATCTCTCATATTTCTACAGTTTCCAGAAATTCGAATTGGCAAGTTCCTTTGGAATTTGAGGCGCTGTCTTGTGTTACTCACTGAAATTAAAATGGATGGTGCAGAGATCGGAAAGATTTTCCAGTCTCACTCCTTATtgttgggttcgttcaccttgaAGAGAACAAATAGTTTGCTTTGTAAGTTGAACATTGGCAAAAGCCGACTTTGTAGGATGATACGGGATAATCCACAAGAATTGAAGAACTGGGCTGTAGGAAGAAAATTGCAGCCTTTGCCAAAGGCAGAGGACGATGTTAAATCACAAATGCAGAAGATGGAGTTTTTGTTGAGTTTGGGATACCAAGAGAACtcacaaaaattgaaatatgcaTTTAAGGTTTTCAGAGGTAAGGGAGCAGAGCTTCAGGAGAGATTCGATTGTATTGTTAATGCTGGCTTGGATTATGAGGATGTCCATGAAATGATTAAGGTTGCTCCTCAGATTCTTAATCTGAAAACGGATGTGATCGACATGAAAATTAACTTACTCGTAAATGAACTGGGATATCCCATATCAACACTAGTGAATTTCCCAGCTTATCTCTCCTTTACTCCTGAAAGAGTAAAGCTTAGGGTGTCAATGTACAATTGGCTTAGAGATGAAGGAACTGCAGATTCCAAGCTTGCTCTGAGCACTATAATTGTTTGTAACGAAAAAACATTCATAAACCAGTTTGTAAATCATCATCCAACTGGCCCTCAAGTTTGGCAAGATCTgaagaaaaaatcttattctGAGAAACTTAGAGAATG 1778 0.3684 MTRSRKIRIPFNFKWAISNFSGDQLGSSENPLWPALLYRLAQNPRNHATKRAVESSHCDGHDVTLTTEKENAPKFSPTTLKEAQAALLDYLHYTRSLQFTDADNMGRNSPYFLEELLEKVGKGEDIRRSITRYLRYHPINEFAPFFESIGLKPSEYMPFLPRDLMFLCDDELLLENYEMLCNYGIPRNKIGKIYKEAIQVFHYSHGVLASKLQAYEELGISKSFLVEVIASSPYVLIGDINLDVVEVVEKLEHFGKDINWVEEHLLDGTSYNWGQVLELLCLLGKFSSEEQLGEIINQHPDFLFEDSGSRTISLIVFFLKLGLSINQISLIFLQFPEIRIGKFLWNLRRCLVLLTEIKMDGAEIGKIFQSHSLLLGSFTLKRTNSLLCKLNIGKSRLCRMIRDNPQELKNWAVGRKLQPLPKAEDDVKSQMQKMEFLLSLGYQENSQKLKYAFKVFRGKGAELQERFDCIVNAGLDYEDVHEMIKVAPQILNLKTDVIDMKINLLVNELGYPISTLVNFPAYLSFTPERVKLRVSMYNWLRDEGTADSKLALSTIIVCNEKTFINQFVNHHPTGPQVWQDLKKKSYSEKLRE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02334 592 Pfam mTERF 431 563 IPR003690 GO:0003690|GO:0006355
Bva13g02334 592 Pfam mTERF 288 445 IPR003690 GO:0003690|GO:0006355
Bva13g02334 592 PANTHER CGI-12 PROTEIN-RELATED 13 582 IPR003690 GO:0003690|GO:0006355
Bva13g02334 592 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 13 582 - -
Bva13g02334 592 Gene3D Transcription termination factor 3, mitochondrial 137 267 IPR038538 -
Bva13g02334 592 Gene3D Transcription termination factor 3, mitochondrial 313 583 IPR038538 -
Bva13g02334 592 SMART mt_12 191 221 IPR003690 GO:0003690|GO:0006355
Bva13g02334 592 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Bva13g02334 592 SMART mt_12 481 512 IPR003690 GO:0003690|GO:0006355
Bva13g02334 592 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02334 Bva-Chr13 17791420 17793824 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva13g02334 mTERF 2.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02334 - - qlo:115952342 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02334 13 17791420 17793824 Bva13g02334 13 17791420 17793824 ECH