Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02332 ATGTATTCAACTCAATGGAGATCCGCCAAAGAGATTAGCAGCGTAGCCAGTATTAGAGGCTCTTCGGAAGAGTTTATTAGTTTTCGGGCCACGAGAGCTCCCTGCAACGTTCAGAATCATCTGCAAACACCACCTGCCTTTTCCTCAAGCAATACCCGCTTGACTTTTGAACAAAAAGATGAGATCAGCAACGTTCCTGGTTTTTCTTCAgagtttcaaaagaaaatggatcCAGAAATTGTATTTTGTCAATCTAATTATGAGGATAAATTCACCAATATAGAAGAATCTCTTTGGTCCATCTACGAAGACACCTCTAACTGTGTTCAGTTTCAGGGTCACAATATGCCACTCTATCACCATTTTGCAGAAGATAGTAAGTTGCCGGAGGAGAATGTTAGTACTGACCATGTTGCCACAGTCGGGAGGCTACCATCTATTTCTTTACAGAGGAATCAggataatgataataaacaTTATTCTCGACCATTTGAGGCTGGTGGTATTTCTTCTAGTTCCGCCAACTACGTCTCTAGGACAGCttcaaaagggaaaaggaGAATAAGATGGACCAAAGATCTTCATGACCCATTTATTACGATTGTCGATCGACTTGGTGGTCCTCAAAAGGCAAAGCCTAAGGAAATACTGAAGATGATGGGTTCGGATAAGCTGACCATATCTCACATTAAAAGTCACCTGCAgAAATACCGATCTACATTGTACATGCAGAAAGCTCTGCAGGAAGGACATGTGGAAAATCATTCAAGAGTCGACGGGAACGCTGAGCTTCAACTCAAAATCCATATGCAAATAGAGGAGTCACGGCAGCTGCAACTGGAGGTGGAGAGGAGACTCAAGGAACAATTAGAGATGCAACGAAATATGCAAGTGCTCATTGAACAACAGAAGAAGCAGCTCTTTATAATGTTAAATCGTCGAAAGCTAAAAAACAATCTGGAAGGGTCTCTCTCGGAATG 980 0.4 MYSTQWRSAKEISSVASIRGSSEEFISFRATRAPCNVQNHLQTPPAFSSSNTRLTFEQKDEISNVPGFSSEFQKKMDPEIVFCQSNYEDKFTNIEESLWSIYEDTSNCVQFQGHNMPLYHHFAEDSKLPEENVSTDHVATVGRLPSISLQRNQDNDNKHYSRPFEAGGISSSSANYVSRTASKGKRRIRWTKDLHDPFITIVDRLGGPQKAKPKEILKMMGSDKLTISHIKSHLQKYRSTLYMQKALQEGHVENHSRVDGNAELQLKIHMQIEESRQLQLEVERRLKEQLEMQRNMQVLIEQQKKQLFIMLNRRKLKNNLEGSLSE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02332 326 SUPERFAMILY Homeodomain-like 184 240 IPR009057 -
Bva13g02332 326 Gene3D - 184 242 - -
Bva13g02332 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 182 242 IPR017930 -
Bva13g02332 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 24 323 IPR044848 GO:0003700
Bva13g02332 326 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 24 323 - -
Bva13g02332 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 185 239 IPR006447 GO:0003677
Bva13g02332 326 Pfam Myb-like DNA-binding domain 189 238 IPR001005 -
Bva13g02332 326 Pfam MYB-CC type transfactor, LHEQLE motif 270 313 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02332 Bva-Chr13 17781281 17783164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02332 163 325 G2-like Transcription Factor Family AT3G04450 37.725 3.81e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g02332 Myb_DNA-binding 5.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02332 - - gmx:102662952 207.994