Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02331 ATGAACGAGAACAGGATTGATTGCCGAGGAGGGATTCAACAGAGCCATGTACTGAATGGTGGCTGGAATTTTGAGTTTGGAAATCGTTCTTGTCAATATTATGATATCAAACAGTCGTGGAATGTGGGAATTTGCAGCCAGTCACTGCCACAGGCGGTAGCCATGGCGGAAGGAACAGAAGAGCCAAGTCCATACGCAGACCCTGCTACTGCAAGATCATCTACAGCCATAATGCACCGTTTTGAACCGCCAGCTTCTGCTTTCTATGCAACAGAACGCTGCATGGGGTTTGCACAATATGATTCCCCACTTGGTAATCCCTCTTTGAGCTCTCACTCTCAGTTTTCAAAGATTAACGATTTGGATTTTCCTCTGTATCAATCACCCAGGGAAAACCTTTTCTTAGATTCAGCAAACCAAGCTGACCCCAACTTGGAATTATGTAACACCTTGCAAGCAATGGtgaaacctcaattgaatagtGATCCATACTGTAGATCACCTgaaaaatccaataaaatCCCATGTGGGAGTTTGTCTGCCAGCAAGTTGTTCATTGATGATTCACTCAGGAGGAATTTATCCACTCCTTTTAAAGCAAATCAGGATCATACAGTTGTTTGCGGCTCGTATAGTTTACCTGTTGCCCAGCAAGAGAAGCTATCACCCAcactttcatcatcatcaactaTGTCAAATGCTTCTGGTAACCCTGCTTCAAATGGGTCAGTAGTCTCTAGTAAAACACGAATAAGATGGACTCAGGCCCTTCACGACAAATTTGTTCAGTGTGTGAATCGCTTGGGGGGCGCTGAGAAGGCAACGCCCAAAGTTATACTAAAGCTGATGGACTCAGATGGATTGACTATCTTCCATGTAAAGAGTCATTTGCAGAAATATAGAATTGCAAAATACATACCAAATTCAGCTCAAGGGAAGTCTGAAAAAAGAACGCAATCTGAGGATGAACCTCATCTTGATCTTAAAACTGGCTTGCAAATCAGAGAGGCACTTCAGCTGCAATTAGATGTTCAGATGCGCCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGTTACGGATTGAAGAACAGGGGAAGCAGCTGAAGATGCTGTTTGACCAGCAGCAGAAGACAAGCGATAGCCCATTGAATTCTGAGAATCTGGGAAGCACGCCCAATGATGATACAACGATTAGTCCCGAAGATATTGAGGTTTCGATTTCTCAAGGGTCGGGAAattctttcttcccttccaaGATAAGTTA 1268 0.4125 MNENRIDCRGGIQQSHVLNGGWNFEFGNRSCQYYDIKQSWNVGICSQSLPQAVAMAEGTEEPSPYADPATARSSTAIMHRFEPPASAFYATERCMGFAQYDSPLGNPSLSSHSQFSKINDLDFPLYQSPRENLFLDSANQADPNLELCNTLQAMVKPQLNSDPYCRSPEKSNKIPCGSLSASKLFIDDSLRRNLSTPFKANQDHTVVCGSYSLPVAQQEKLSPTLSSSSTMSNASGNPASNGSVVSSKTRIRWTQALHDKFVQCVNRLGGAEKATPKVILKLMDSDGLTIFHVKSHLQKYRIAKYIPNSAQGKSEKRTQSEDEPHLDLKTGLQIREALQLQLDVQMRLHEQLEIQRKLQLRIEEQGKQLKMLFDQQQKTSDSPLNSENLGSTPNDDTTISPEDIEVSISQGSGNSFFPSKIS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02331 422 MobiDBLite consensus disorder prediction 222 245 - -
Bva13g02331 422 MobiDBLite consensus disorder prediction 374 422 - -
Bva13g02331 422 Coils Coil 335 355 - -
Bva13g02331 422 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 69 422 - -
Bva13g02331 422 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 248 303 IPR006447 GO:0003677
Bva13g02331 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 69 422 IPR044848 GO:0003700
Bva13g02331 422 Pfam MYB-CC type transfactor, LHEQLE motif 332 379 IPR025756 -
Bva13g02331 422 Gene3D - 247 306 - -
Bva13g02331 422 SUPERFAMILY Homeodomain-like 246 302 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02331 Bva-Chr13 17776439 17778796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02331 233 396 G2-like Transcription Factor Family AT3G04450 51.190 4.28e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g02331 Myb_CC_LHEQLE 3.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02331 - - gmx:100780919 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02331 13 17776439 17778796 Bva13g02331 13 17776439 17778796 ECH