Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02319 ATGGAAACCATGGAAATCGACTCGGAGAAGAACCTCGTCAGACAGCAATGTGCCTATTACTCCTTAGATGAAGCCTTTGGAATTCAGAAAGAGACGTATAGGGGGCAGCAGTACAGTCAGATTTACTTTGCTCGTCTTCATCTAATGAGAACTCTCTTATATTCCCTTGTTTCTAATTGGAAGCCCCATTTACCTGTATGCAGGGTGTTGGCACTTGAACAGGGCAAGGAATGTATCATTGTTGGAACTCTGTATAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCTAAAGAGAGATCTGCAACTCCACTTGTCCAACCTCATAACTTTATGCATGCTGATGATCATCTAGTTTTGGAAGATGAAAGTGGGAGAGTTAAGCTTGGTGGGAATATCCTTTCCCTTCTGGATGTGTTACAGGAAACCGAGGCAGGTGAATTTTTGGTTCAAGATTTCCTGGAAGCTGGCCTACCACCACAGATAAAACTTCCCCTTATATCAACGGGAGATAAATATGTAGTTTTTGTTTCGGGATTGAGTATTGGGAGTGACAACTGTAATCCTCTCCAAGTTCAGCTTCTCATTGATCATATTACTGGACATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCTCAGATTGTTCATGTTGTTATTGCTGGAAATTCTATTGAGATCCCATGTGGACTTCTTAATGGACAGAATTTAGCTTCAAAGGATCTCTCAAGGCTGTCTGAACCGATAAAGGAGCTGGATATTCTGTTGAGTCAGATTGCTGCAGGTTTGCCTTTGGATATCATGCCAGGACCTGGTGACCCTGCGAACTTCTCATTGCCACAGCAGCCTCTGCATAGATGCCTTTTTCCAGGGTCATCAGCTTATAACACTTTTAGATCCTGTACAAATCCTCATTTGTTTGAACTTGATAAAATCAGTTTTCTTGGGACATCGGGTCAGAATATAGATGATCTTGAGAAGTATTCAGAGGCAAAAGATAAACTTGAATTTATGGAAAGGACGTTAAGGTGGAGGCATTTGGCACCAACAGCACCTAATACTCTTGGGTGCTATCCTTACACCGATAGGGATCCCTTCTTCATTGAGAGCTGTCCTCATGTTTACTTCGTTGGCAATCAGGATAAATTTGCAACACGTGTGGTGAAGGGTTCTGAAGGACAATTGGTGAGACTCATATCCATCCCAAAATTCAGTGAGACTGGAGTTGCTGTCACGTTAAATTTGAGGGATCTTGAATGTCACGCTCTCAGTTTTGGGACTCAATTGAGCTCATA 1301 0.4197 METMEIDSEKNLVRQQCAYYSLDEAFGIQKETYRGQQYSQIYFARLHLMRTLLYSLVSNWKPHLPVCRVLALEQGKECIIVGTLYKHMKLKPCILDEYSKERSATPLVQPHNFMHADDHLVLEDESGRVKLGGNILSLLDVLQETEAGEFLVQDFLEAGLPPQIKLPLISTGDKYVVFVSGLSIGSDNCNPLQVQLLIDHITGHLGDEKEQSIASQIVHVVIAGNSIEIPCGLLNGQNLASKDLSRLSEPIKELDILLSQIAAGLPLDIMPGPGDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHLFELDKISFLGTSGQNIDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDRDPFFIESCPHVYFVGNQDKFATRVVKGSEGQLVRLISIPKFSETGVAVTLNLRDLECHALSFGTQLSS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02319 433 Pfam DNA polymerase alpha/epsilon subunit B 176 387 IPR007185 GO:0003677|GO:0006260
Bva13g02319 433 Pfam DNA polymerase delta subunit OB-fold domain 37 136 IPR040663 -
Bva13g02319 433 CDD MPP_PolD2_C 175 427 IPR041863 -
Bva13g02319 433 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 8 427 IPR024826 -
Bva13g02319 433 Gene3D - 43 158 - -
Bva13g02319 433 Gene3D - 169 432 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02319 4 432 Core DNA Replication Machinery Family AT2G42120 75.342 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02319 K02328 - vvi:100241865 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02319 13 17709941 17715737 Bva13g02319 13 17709941 17715737 ECH