Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02317 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCCTGCTTGAGACCGGTAAGGCGGTATGCCCGTATGAACAAGGGTGATTCATCAGAATCATCCTCCATTGAAGACGCTCTCCTCTGGTACAAGGACCTCGAGAAGCACTCCTGCGGTGAATTCTCTTTTGCGGTGGTTCAGGCCAATGAAGTTATTGAGGATCACAGCCAGGTCGAAACGGGCTCTGGCGCTATGTTCGTCGGTGTATATGATGGCCATGGCGGTCCCGAAGCTTCCCGGTTCATTGGCGACCACCTCTTCCATCATCTAATGAGGATTGCTCGTGAAAATGGAACTATATCTGAAGATATTCTCAGGGGTGCTGTTTCTGCTACCGAGGATGGGTTTCTGACTCTAGTTCGAAGGACTTATGGCATAAAGCCATTGATAGCAGCAGTGGGTTCGTGTTGTCTGGCTGGTGTTATTTGGAAAGGGACCTTATATGTCGCCAATCTCGGAGACTCTCGTGCTGTAATTGGTTCTTTAGGTGGATCTAATAAGATCGTTGCCGAGCAGTTGACCAGAGAGCACAATGCAAGCAAAGAAGAGGTTAGACGAGAATTAAGATCATCGCATCCAGAAGATTCACAAATTGTAGTCATGAAGCATGGAACATGGCGAATTAAAGGAATCATCCAGGTATCCAGATCTATAGGCGATGCATATTTGAAGAGACCAGAGTTCTCTCTTGATCCTTCGTTTCCACGGTTCCACATGCCTGAACCTATACGCAGGCCTGTGCTAACTGCTGAACCTTCTATATGTTCAAGAGTTTTGCAACCTAACGATAAATTCCTTATATTTGCATCTGATGGGCTTTGGGAACACTTGACAAATCAAGAAGCTGCTGAGATTGTGTACAACAACCCACGAGCtGGGATTGCAGGGAGACTTCTTAAAGCTGCTTTAAATGAGGCAGCTAGGAAAAGGGAAATGAGATATAAAGATCTGCAGAAGGTTGAGAAGGGGATTAGGCGGTTTTTTCACGATGATATCACAGTTGTTGTTGTCTTCGTAGACCATGATTTGCTTGCAAAGAATATTACCGTTCCAGAGTTATCCGTTAGAGGGTTCGTTGATACCGTTGGAccatcaaatttcaaagttgtCCAGGGATTGATGTG 1154 0.4497 MFSWLARIVSACLRPVRRYARMNKGDSSESSSIEDALLWYKDLEKHSCGEFSFAVVQANEVIEDHSQVETGSGAMFVGVYDGHGGPEASRFIGDHLFHHLMRIARENGTISEDILRGAVSATEDGFLTLVRRTYGIKPLIAAVGSCCLAGVIWKGTLYVANLGDSRAVIGSLGGSNKIVAEQLTREHNASKEEVRRELRSSHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHMPEPIRRPVLTAEPSICSRVLQPNDKFLIFASDGLWEHLTNQEAAEIVYNNPRAGIAGRLLKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFVDHDLLAKNITVPELSVRGFVDTVGPSNFKVVQGLM 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02317 384 SUPERFAMILY PP2C-like 56 350 IPR036457 -
Bva13g02317 384 Coils Coil 180 200 - -
Bva13g02317 384 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Bva13g02317 384 PANTHER ALPHABET, ISOFORM E-RELATED 6 369 - -
Bva13g02317 384 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Bva13g02317 384 SMART PP2C_4 44 347 IPR001932 -
Bva13g02317 384 Gene3D - 22 358 IPR036457 -
Bva13g02317 384 Pfam Protein phosphatase 2C 72 314 IPR001932 -
Bva13g02317 384 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 369 - -
Bva13g02317 384 CDD PP2Cc 51 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02317 Bva-Chr13 17704006 17707124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02317 1 379 PP2C-type Phosphatase Gene Family AT5G06750 69.744 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02317 K01102 - gmx:100778238 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02253 04 21401613 21404930 Bva13g02317 13 17704006 17707124 BWGD
Bva13g02317 13 17704006 17707124 Bva13g02317 13 17704006 17707124 ECH