Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02311 ATGCAACTTTCCCAGATAGTTCTGTGTCTGTTGCTAGCAGTGATCTTGAGCAGTGCTCTTGTCCAAGTTGGCTGCTTCTCTTTCAACTTTCCTACCTTCAAACAAGAGGACGTTTATCATTTAATCTTGAACCCAAATTCAGTAGTATTCCAGGAGGCCATCCAAGTAACCCCTGATCTTAGCCGTGACATAACTAACAAGTCTGGGCGTGCTTTCTACGGAAAGCCGTATAGACTGTGGAGCAAGAAGAAGAACCAAACTGCTGCGTTTAACACCACCTTCGTGCTCAATATCTTACCCAGAACTTCACCAGTTGGAGGTGAAGGTTTGGCCTTCATATTAGCTGCAGATACCTCTCTCCCAGAAAACAGTGAAGGAAGATGGCTTGGCATTGTAAACTCCACAACCAATGGCACTGTCCAAGCAGCCATTTTGGCAGTGGAGTTCGATACAAGAAACAGCTCCATCGATGATGGCCCCGATGACCACGTGGGCATCAGCATCAACAGTGTTTATTCCATCAAACAAGCGCAGTTAATGAACTTTGGGATCAACATCTCATCAGGTTCCAATGTAACAGTGACAATTCAATATGCTAATGATATAATTTCTGTTTTCGGAGCCATGAGTGAAACTGCACAACAAGGTATGGAGACTCTGCTGATTTCTCCTCCTCTTAATCTATCTTCCTATCTCCCAGAAAAGGTTTACGTGGGTTTCTCAGGTTCAACAAGTATTTACACAGAGCTGAACTGTGTAAGAGCATGGGAGTTTACCGGTACAGATATTGGAGATGATGGGAATAGATTATGGGTTTGGATCACAGTTCCAGCAGCGCTGATCATCAAAGGAACGGTGCTCTTTATCTTGTTCTGGCTTATAAAACGCAGGAGGAAGATATCAGAGGATGCTTATCCTAGGATAGAGGATCAGATTCAGGGTTCCTCAATGGCTCCGAAGAAATTTCGACTGGGGGAACTAAAAAAGGCAACAGCGAATTTCAGCCCACAAAACAAGCTCGGTGAAGGTGGTTTTGGAACTGTTTACAAGGGAATCTTGGGAGATAAAGAGATAGCAGTAAAACGAGTCTCCAAGGATTCACGACAGGGCAAGCAAGAATTCATAGCAGAAGTCACAACAATTGGCAGCCTCAATCACAAAAATTTGGTCAAACTGATAGGCTGGTGCTATGAGAACCGAGAACTGCTTCTTATCTACGAGTTCATGCCTAATGGGAGCTTAGATAGGTGCCTATTTTCTGAcgaaaagttgaaattttgtagAGGAGAGGGATCGGAATCAGATTCAGAACTGTGCTGGGAAACAAGGCACAGCGTGATATATGGGGTGGCTGAGGCACTCAACTATCTTCACAGTGGGAGTGACAAGAAGGTGCTTCACCGAGACATAAAGGCTAGCAACATAATGCTGGACTTGGATTTTAATGCTAAGCTGGGAGATTTTGGATTGGCTCGCACCATTCAGAAGAGAAACGAAACTCACCACTCCACAAAGGAAATTGCTGGAACACCAGGTTACATGGCTCCAGAAACGTTCCTTTCTGGTGGGAGGGCAACTGTGGAGACTGATGTTTATGCATTTGGGGTTCTCGTGCAAGAAGTTGTGTGTGGGAAGAGGCCAGGGAATCCGTACGGCGAGAATGACTACAATAAGAGCCTTGTGTATTGGGTGTGGGATCTTTATGGGAAGGGAAGAATACTTGATTCTGTGGATGATAGAATAGCCAAAGagatcaaagaaaaagaacaagtaGTAGAACGTGTGCTTGTTTTGGGGTTGGCTTGTTGTCACCCGAACCCTCACCAGAGGCCCTCCATGAACACTGTGCTCAAGGTTCTTACAGGGGAAGCGTCTCCACCAATGGTGCCCAAGGAAAGGCCTGCGTTTGTGTGGCCTGCCATGCCTCTTTCCTTCAAAGAAGATGCAGATAGTTCTATGTTAGCAGGACAAATCACTCCTTTCACAGAACTCGCTGGCAGATG 2003 0.4468 MQLSQIVLCLLLAVILSSALVQVGCFSFNFPTFKQEDVYHLILNPNSVVFQEAIQVTPDLSRDITNKSGRAFYGKPYRLWSKKKNQTAAFNTTFVLNILPRTSPVGGEGLAFILAADTSLPENSEGRWLGIVNSTTNGTVQAAILAVEFDTRNSSIDDGPDDHVGISINSVYSIKQAQLMNFGINISSGSNVTVTIQYANDIISVFGAMSETAQQGMETLLISPPLNLSSYLPEKVYVGFSGSTSIYTELNCVRAWEFTGTDIGDDGNRLWVWITVPAALIIKGTVLFILFWLIKRRRKISEDAYPRIEDQIQGSSMAPKKFRLGELKKATANFSPQNKLGEGGFGTVYKGILGDKEIAVKRVSKDSRQGKQEFIAEVTTIGSLNHKNLVKLIGWCYENRELLLIYEFMPNGSLDRCLFSDEKLKFCRGEGSESDSELCWETRHSVIYGVAEALNYLHSGSDKKVLHRDIKASNIMLDLDFNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLSGGRATVETDVYAFGVLVQEVVCGKRPGNPYGENDYNKSLVYWVWDLYGKGRILDSVDDRIAKEIKEKEQVVERVLVLGLACCHPNPHQRPSMNTVLKVLTGEASPPMVPKERPAFVWPAMPLSFKEDADSSMLAGQITPFTELAGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02311 667 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 4 653 - -
Bva13g02311 667 Pfam Protein kinase domain 337 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02311 667 Pfam Legume lectin domain 27 263 IPR001220 GO:0030246
Bva13g02311 667 ProSiteProfiles Protein kinase domain profile. 334 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02311 667 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Bva13g02311 667 SUPERFAMILY Protein kinase-like (PK-like) 316 620 IPR011009 -
Bva13g02311 667 Gene3D Phosphorylase Kinase; domain 1 319 408 - -
Bva13g02311 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Bva13g02311 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 263 IPR013320 -
Bva13g02311 667 Gene3D - 25 266 - -
Bva13g02311 667 SMART serkin_6 334 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02311 667 PANTHER - 4 653 - -
Bva13g02311 667 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Bva13g02311 667 CDD STKc_IRAK 340 622 - -
Bva13g02311 667 ProSitePatterns Protein kinases ATP-binding region signature. 340 361 IPR017441 GO:0005524
Bva13g02311 667 Gene3D Transferase(Phosphotransferase) domain 1 409 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02311 Bva-Chr13 17679821 17681824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02311 1 636 Receptor kinase-like Gene Family AT5G55830 34.559 1.90e-114 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva13g02311 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02311 - - gmx:100790353 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02311 13 17679821 17681824 Bva13g02311 13 17679821 17681824 ECH