Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02310 ATGCTAAGGCCTGAGCATTTGATGAAAAGGATCAAGGCGTACTTTTCTCGGATAGTTTTGTGTCAGTTGCTAGGAATGATGTTGAGCAGCGCTCTTGTCCAAGTTGGCTGCTTGTCTTTCGGGTTTCCTATCTTCCAACCAGAGAATGTAGGTGAATTAATATTGAGCAGAAATTCACAAGTATTCTCAGATGCCATCCAAGTAACCCCTGATCTTAGCCTTGACATGATTAATGTGTCTGGACGGGCTTTCTACAGGGAACAGTTGAAGCTATGGGACAGCCGGAGAAGTGTGAAAGCTTCATTCAATTCGAGCTTCGTTTTGAATATTAATCCCAGAACCTCTCCTGGTGGTGAGGGATTAGCTTTTATATTAGCCGGTCACACAACTCTTCCGGATAACAGTGCAGGGAAATGGCTTGGAATAGTCAATCAGTCAAGCATAGGGCTAAGCGACGTGATTGCAGTGGAATTTGACACCAGAAAGAGCTACCCAGAGGATATCGATGATAACCATGTTGGGGTCGATGTTAAAAGCATCTATTCAATCCAGCAACAGCCTCTTGGAGCTCATGGGGTTAATCTTTCAGGTGGTACTGATATTACTGCTACTGTTCTCTTTGATGCCGAATCAGGAAAATTGACAGTTCTTGTTTCCACGTTATTAATGCTCACAGTGGATCTAGATCTCTCTAAACTGCTTCCAGAGGATGTATTTGTAGGATTTTCTGCTTCCACTGGGGTTTACACCCAGCTTAATTCAATAAGGTCATGGAATTTTTCCAGTTGGGAGGTTCATATAGAAGAGAAGGATCCGAATCTAATATGGCTGTGGATCTTGATTCCAATAATTGTGCTTGGGGGAATAGCTGCCGTTGCTGCTATTTGTTACATGAAAAGAAAGTGCAGAAAGGAGCAGGGGCTGGATGAGGATCTGCAGATAGagcttcaaattaaaagcTCATCAAATGCTCCACATAAATTTCGTCTGAAGGAGCTTGTTTCTGCCACAGAGAATTTTAACTCATCAAACAAGCTTGGGAAAGGAGGTTTTGGGACGGTTTATAAAGGGACACTGATGAATGGCAAGGATATTGCtgtaaaaagaatttcaaaggATTCCCGTCATGGGATCCAAGATTTTTTAGCAGAGATCACAACTATGGGTAATCTCAATCACAAGAATCTGGTAAAATTAATTGGATGGTGCTACGAGAAAGCTCAACTTTTCCTTGTGTACGAGTTCATGCCAAATAGAAGCCTagacaaattcatcttttcCGGCAATATCCCATCTTCTGCACAGGATTTACCTCTGAGTTGGGAAAGAAGGCATAGCATCATATGTGGGGTGGCTCGAGCACTAGACTATCTCCACAATGGGTGTGATAAAAGAGTACTACACAGAGACATTAAACCTAGCAATGTGTTGTTGGATTCAGAGTTCAATTCTCGACTTGGGGATTTTGGCTTAGCTCGCACCATTCAAATAAGTGACAAAACTCACCATTCGACAAAGGGGATTGCTGGAACACCAGGATATATGGCACCTGAAAGCTTCCATACTCAAAGGGCCACTGTTGAAACTGATGTGTATGCGTTTGGAGTTCTTATGCTAGAAGTTGTCTGCGGAAGAAAGCCAGGACATCAAAATGGGCCAAATAATAATGACAACAGCATAGTGGAGTGGGTGTGGGAACTTTATAGCAGAGAAAGTGTAACTGAGGCTGTAGATACGCGTTTGAAAGGTGATTTTGACATGGATGAAGCCAAGTGTTTGCTTGGATTGGGATTAGCCTGCTGCCATCCCAACCCATACGAGAGGCCATCCATGAGAAGTGTCTTGCAGGTTCTCACAGGGGAAGCAGCTCCACCATTTGTACCTTATGAGAAACCCCACTTCGTATGGCCAGTCACGCAACCAGCTCTTGAACAAGATCTAAATTACCAAACCAGTATATCTCAATGTACAACAATAACAGAATTGGCCACTGGGAGATG 2000 0.423 MLRPEHLMKRIKAYFSRIVLCQLLGMMLSSALVQVGCLSFGFPIFQPENVGELILSRNSQVFSDAIQVTPDLSLDMINVSGRAFYREQLKLWDSRRSVKASFNSSFVLNINPRTSPGGEGLAFILAGHTTLPDNSAGKWLGIVNQSSIGLSDVIAVEFDTRKSYPEDIDDNHVGVDVKSIYSIQQQPLGAHGVNLSGGTDITATVLFDAESGKLTVLVSTLLMLTVDLDLSKLLPEDVFVGFSASTGVYTQLNSIRSWNFSSWEVHIEEKDPNLIWLWILIPIIVLGGIAAVAAICYMKRKCRKEQGLDEDLQIELQIKSSSNAPHKFRLKELVSATENFNSSNKLGKGGFGTVYKGTLMNGKDIAVKRISKDSRHGIQDFLAEITTMGNLNHKNLVKLIGWCYEKAQLFLVYEFMPNRSLDKFIFSGNIPSSAQDLPLSWERRHSIICGVARALDYLHNGCDKRVLHRDIKPSNVLLDSEFNSRLGDFGLARTIQISDKTHHSTKGIAGTPGYMAPESFHTQRATVETDVYAFGVLMLEVVCGRKPGHQNGPNNNDNSIVEWVWELYSRESVTEAVDTRLKGDFDMDEAKCLLGLGLACCHPNPYERPSMRSVLQVLTGEAAPPFVPYEKPHFVWPVTQPALEQDLNYQTSISQCTTITELATGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02310 666 CDD STKc_IRAK 346 620 - -
Bva13g02310 666 CDD lectin_legume_LecRK_Arcelin_ConA 38 262 IPR001220 GO:0030246
Bva13g02310 666 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Bva13g02310 666 PANTHER - 28 648 - -
Bva13g02310 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 28 648 - -
Bva13g02310 666 Gene3D Phosphorylase Kinase; domain 1 301 415 - -
Bva13g02310 666 Pfam Protein kinase domain 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02310 666 ProSiteProfiles Protein kinase domain profile. 340 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02310 666 SMART serkin_6 340 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02310 666 SUPERFAMILY Protein kinase-like (PK-like) 321 618 IPR011009 -
Bva13g02310 666 Gene3D Transferase(Phosphotransferase) domain 1 416 623 - -
Bva13g02310 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 263 IPR013320 -
Bva13g02310 666 Pfam Legume lectin domain 38 271 IPR001220 GO:0030246
Bva13g02310 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Bva13g02310 666 Gene3D - 36 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02310 Bva-Chr13 17675729 17677729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02310 80 632 Receptor kinase-like Gene Family AT5G55830 38.898 1.14e-118 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva13g02310 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02310 - - tcc:108661882 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02310 13 17675729 17677729 Bva13g02310 13 17675729 17677729 ECH