Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02299 ATGTCTTCTGATTCAAACAATTTGCAtaagagaaagataaaaATTTCGTTTTCTGCCCATTTCGTGCATGGTTGCCTCATTCAGCTTTGTGGGTTGATCAGAGACAGGACTGCTGCTGCATCGACCACAAGTATGTTGTGCTGTGGAGGTGCGGAGGAGGAGAGCAGCGGCCCACCTGCAAACCAATATACCGCACCACCAAGTACAAACGGTGGCGGAAGAGGCAACGACAGAGGAGAGCCAAGAGGATCACAAGCTGTCAGGAGTGGCGGTGCTCCACAGAAAGAATTGTCAATTGATATACCCGCTATTCCATTAGATGAGTTAAATAGGTTAACAGACAACTTCGGTTCAAAGGCTTTGATTGGAGAAGGTTCTTATGGACGGGTTTTCTATGCCGAGCTAAGAGATGGTCAACCTGCAGCAATCAAGAAGCTGGATGCAAGTTCTTCACAAGAACCAGACTCTGATTTTGCTTCACAGTTATCTATAGTTTCAAGGCTGAAACATGAACATTTTGTGGAGTTGATGGGATATTGCCTGGAGGAGAACAACAGAATTTTGGTTCATCAATATGCAACTATGGGTTCTTTGCATGACATCTTGCATGGAAGAAAAGGAGTACAAGGGGCTGAACCTGGTCCAGCTCTAAGCTGGATCCAAAGAGTAAAAATTGCATTTGGTGCAGCAAAGGGCCTTGAGTATCTGCATGAAAAGGTTCAGCCTCCTATGGTTCATCGCGATGTTAGATCCAGCAATGTCTTACTGTTTGATGACTACTTGTCCAAGATTGCCGATTTCAACTTGACAAATCAGTCCTCTGATACAGCAGCTAGGCTACATTCAACCAGAGTCTTGGGAACATTTGGCTACCATGCTCCGGAgTATGCCATGACTGGGCAAATAACCCAAAAGagtgatgtttatagttttggagttGTTCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTAGACCATACAATGCCAAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCCAGGCTGAGTGAGGACAAGGTGAAGCAATGTGTGGATCCAAAGCTAAACAATGAGTACCCTCCAAAGGCAGTTGCTAAGTTGGCAGCGGTTGCAGCACTTTGTGTTCAATATGAGGCTGATTTCCGGCCAAACATGACCATTGTTGTCAAAGCCTTACAGCCACTTCTCAATGCAAAACCGCCTGCCCCGGCTCCTAATGCTGGGCCTGGGCCCTA 1241 0.448 MSSDSNNLHKRKIKISFSAHFVHGCLIQLCGLIRDRTAAASTTSMLCCGGAEEESSGPPANQYTAPPSTNGGGRGNDRGEPRGSQAVRSGGAPQKELSIDIPAIPLDELNRLTDNFGSKALIGEGSYGRVFYAELRDGQPAAIKKLDASSSQEPDSDFASQLSIVSRLKHEHFVELMGYCLEENNRILVHQYATMGSLHDILHGRKGVQGAEPGPALSWIQRVKIAFGAAKGLEYLHEKVQPPMVHRDVRSSNVLLFDDYLSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPPAPAPNAGPGP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02299 413 Gene3D Transferase(Phosphotransferase) domain 1 194 403 - -
Bva13g02299 413 ProSiteProfiles Protein kinase domain profile. 116 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02299 413 Gene3D Phosphorylase Kinase; domain 1 92 192 - -
Bva13g02299 413 SMART tyrkin_6 116 394 IPR020635 GO:0004713|GO:0006468
Bva13g02299 413 PANTHER OS03G0226300 PROTEIN 45 407 - -
Bva13g02299 413 MobiDBLite consensus disorder prediction 51 94 - -
Bva13g02299 413 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Bva13g02299 413 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 45 407 - -
Bva13g02299 413 SUPERFAMILY Protein kinase-like (PK-like) 96 394 IPR011009 -
Bva13g02299 413 MobiDBLite consensus disorder prediction 57 71 - -
Bva13g02299 413 ProSitePatterns Tyrosine protein kinases specific active-site signature. 244 256 IPR008266 GO:0004672|GO:0006468
Bva13g02299 413 Pfam Protein tyrosine and serine/threonine kinase 121 394 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02299 Bva-Chr13 17609788 17613685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02299 101 404 Receptor kinase-like Gene Family AT3G58690 44.590 1.31e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Bva13g02299 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02299 - - tcc:18599139 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02272 04 21482737 21485825 Bva13g02299 13 17609788 17613685 BWGD
Bva13g02299 13 17609788 17613685 Bva13g02299 13 17609788 17613685 ECH