Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02293 ATGGACAAGACCATTGATAGGGAGACCCATGATTTCATGAACGTTGAATCCTTCTCTCAGCTCCCTTTTATACGCCCTGCACCTGTTAAAGAAAAGCCCATTAGGCTTTTCGGCAAGGAATTCGGCAGCGGCGACGCAGTCCCTCCTGCCGTTGCTGCCGATGAGTCCGAGTCCACCGAGACAACCACAAACGCCTTCGAAGTCGACACCAAAGAAAACAACACCGAGAACGGCGAAAGCAGCCGCAGATTCGAATGCCATTACTGCTGCAGAAACTTCCCCACTTCACAAGCCTTGGGTGGCCACCAAAACGCCCATAAACGCGAGCGCCAACACGCGAAACGTGCGCATCTTCAGTCAGCCATGGTGCACAATAGCCTCTCCGAAGCCCAAGTCTATGGCCTCATGAACTACAGGCTCAGTTCAACTCCAACCACTCCAATGGCTACGTATCCCACGTGGAATACTAGCTCAACTCCTATTACTTCTGGAAGGTTCTACGGAAGCCATGGAATTGGAACCACCTCGTATTCTTACCATCATCAGCAACAGCAGCAACCCATCAATGGGAGCCCCTTGGCCTTCTGGCGAATCCCCACCGCCCAAAGTAACCCTACTTTGATTAATCGTGACCGTTCGTTGCATCCATTGCCTTTGCTTGCGGGCGAGGAATTGAACATGAGAGCTTCGCAGGTTGTCGCTGGCTCTGCTCATCCTCAAAACCGGTATGTTTATGACTCCAAACCCAGTAGTGTTCAAGACCATCTTAGTTTGGATCTTCATCTGTA 788 0.5114 MDKTIDRETHDFMNVESFSQLPFIRPAPVKEKPIRLFGKEFGSGDAVPPAVAADESESTETTTNAFEVDTKENNTENGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSLSEAQVYGLMNYRLSSTPTTPMATYPTWNTSSTPITSGRFYGSHGIGTTSYSYHHQQQQQPINGSPLAFWRIPTAQSNPTLINRDRSLHPLPLLAGEELNMRASQVVAGSAHPQNRYVYDSKPSSVQDHLSLDLHL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02293 262 Gene3D Classic Zinc Finger 55 134 - -
Bva13g02293 262 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Bva13g02293 262 Pfam C2H2-type zinc finger 83 108 - -
Bva13g02293 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Bva13g02293 262 PANTHER ZINC FINGER PROTEIN GIS 1 262 - -
Bva13g02293 262 PANTHER ZINC FINGER PROTEIN GIS 1 262 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Bva13g02293 262 MobiDBLite consensus disorder prediction 46 65 - -
Bva13g02293 262 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02293 Bva-Chr13 17559817 17560753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02293 1 262 C2H2 Transcription Factor Family AT3G58070 42.500 3.52e-45 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02277 04 21527382 21528308 Bva13g02293 13 17559817 17560753 BWGD
Bva13g02293 13 17559817 17560753 Bva13g02293 13 17559817 17560753 ECH