Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02274 ATGGCTTCGGCAGAAGTGGCGGTTCCATTGAATGCAGATCCAACCCAACTTGCCGTAGACGTCAAACTCTTCAACAGGTGGAGCTTCGATGACATCCAGGTTAATGACATTTCTCTGGCTGACTATATTGGAGTGGTAGCATCCAAGCATGCAACCTATGTTCCCCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAGGCGCAATGTCCAATAATTGAGAGGCTCACCAACTCTCTGATGATGCACGGTAGAAACAATGGGAAGAAACTGATGGCTGTGAGAATCGTCAAGCATGCTATGGAAATTATCCATTTGTTGACTGAGCAGAATCCCATTCAAGTTATTGTTGATGCTGTGGTTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGCTCGGCTGGAGTTGTTAGGAGACAGGCAGTTGATATCTCACCCCTTCGTCGTGTGAATCAGGCCATCTATCTTCTAACAACCGGTGCTCGTGAAGCGgcttttagaaatattaagaCAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCGGCAAAAGGGTCATCCAACAGCTATGCTATCAAGAAAAAGGATGAGATTGAGAGAGTTGCCAAGGCCAATCGTTA 629 0.4515 MASAEVAVPLNADPTQLAVDVKLFNRWSFDDIQVNDISLADYIGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTEQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02274 209 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 209 IPR000235 GO:0006412
Bva13g02274 209 TIGRFAM uS7_euk_arch: ribosomal protein uS7 21 209 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bva13g02274 209 Coils Coil 197 209 - -
Bva13g02274 209 Pfam Ribosomal protein S7p/S5e 63 209 IPR023798 -
Bva13g02274 209 SUPERFAMILY Ribosomal protein S7 22 209 IPR036823 -
Bva13g02274 209 CDD uS7_Eukaryote 22 209 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bva13g02274 209 PANTHER RIBOSOMAL PROTEIN S7 5 209 IPR000235 GO:0006412
Bva13g02274 209 Gene3D Ribosomal protein S7 domain 2 209 IPR036823 -
Bva13g02274 209 ProSitePatterns Ribosomal protein S7 signature. 75 101 IPR020606 GO:0003723|GO:0003735|GO:0006412
Bva13g02274 209 PANTHER 40S RIBOSOMAL PROTEIN S5 5 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02274 Bva-Chr13 17470117 17472946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02274 2 209 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 87.019 3.56e-134 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02274 K02989 - gmx:100305898 368.622