Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02271 ATGGCAACGGCAACATACCCGCCCCCACCACCCTATTACAGACTCTACAAAGATTACTTGCAAGACCCTAAATCAGCTCCAGAGCCGCCCCCTCCTATAGAAGGGACATATGTATGTTTTGGAGGCAACTACACTACTGATGATGTGCTGCCAAACTTGGAAGAGCAGGGAGTGCGCCAGCTATATCCTAAGGGGCTTAATGTTGATTTTAAGAAGGAGCTGAGAGCACTTAATGGAGACTTGCAGCTACACATTTTGGAACTTGCCGATATCCTCATTGAGAGACCGTCACAATATGCGAGGAGAGTGGAAGAAATTTCTCTTGTATTCAAGAACTTACATCACCTTCTAAACTCACTGCGGCCTCATCAGGCGAGAGCAACATTAATTCACATTCTGGAACTTCAGATACAGCGTCGCAAACAAGCAGTAGAGGACATAAAGAGgagaagagaagaagcaCAAAGACTTCTCAGAGAGTCCCTGGCGTCACTGGATGGTCATTA 506 0.4486 MATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGNYTTDDVLPNLEEQGVRQLYPKGLNVDFKKELRALNGDLQLHILELADILIERPSQYARRVEEISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRLLRESLASLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02271 168 Coils Coil 130 164 - -
Bva13g02271 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 167 IPR009244 GO:0003712|GO:0006357|GO:0016592
Bva13g02271 168 Pfam MED7 protein 4 157 IPR009244 GO:0003712|GO:0006357|GO:0016592
Bva13g02271 168 Gene3D - 62 159 IPR044888 -
Bva13g02271 168 SUPERFAMILY Mediator hinge subcomplex-like 68 159 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02271 Bva-Chr13 17455385 17458424 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Bva13g02271 Med7 1.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02271 K15148 - jre:109003137 294.278