Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02251 ATGGGCAATAATTGTGTAGGACCAAACGCTAGTGGGCATGGATTTCTGCATTCTGTAACGGGGGCGGTTTGGAAAACCCGGCAACCAGAAGACAAGCTTTCTCCGCCAAAAAGCTCTGCAAATGAAAATGCAGGCCCCAATTCCTCTAAAGATTCGAATGCGGCAAAACCTTCTGATGCTTCTAAACGCTCTGATGGTTCTAAAGGTTCTGATGCTCCAATGAATCAAAGTACACCACCTGAAACGGTGAAGATAAGCAGTGCGGAAGTAAGTCATCCGCCGCAGCCTGAAAAGCCTGTCAAGCCAGAAGCGGAAACTGGAAAGCCCGTTAAGCCGGATGCAAGTGCAAATGATCAAGCCTCTAATAATGCCGATGCTGGGAAACCTAAGAAACCTACTCATATTAAAAGGGTATCGAGTGTTGGACTTCAAATAGAATCAGTGTTAGGAAGGAAAACTGGGAATATTAAAGAAGTTTATAGTTTGGGGCGGAAGCTTGGACAAGGGCAATTTGGGACAACGTTTCTTTGTGTAGAGAAGGCAACTGGAAAAGAGTTCGCTTGTAAAACGATTGCCAAGAGGAAATTGACCACAGCAGAGGATGTGGAAGATGTGAAAAGGGAAATTCAGATAATGCATCACTTGGCAGGTCACCCCAATGTGATACAAATAGTTGGATCTTATGAGGATGCGGTTGCTGTCCATCTTGTTATGGAACTTTGTGCTGGTGGGGAGCTTTTCGACAGGATCATACAGAGGGGCCATTACACTGAGAGAAAGGCAGCTGATCTTGCAAGGTTGATAGTTGGTGTCGTTGAGGCCTTCCATTCTTTGGGTGTCATGCATCGGGACTTGAAGCCAGAGAATTTTCTGTTCGTCAGCCAAGAAGAAGAATCAGTTCTTAAAACAATAGATTTTGGACTCTCTATGTTCTTTAAACCAGGTGAAACATTTACCGACGTGGTCGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGCACTATGGTGCAGAATGTGATGTTTGGAGTGCCGGGGTGATAATTTATATCTTACTATGTGGAGTTCCCCCGTTTTGGGATGAAACTGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAACTGGACTTCATCTCTGAACCATGGCCTTCTATATCTGAAGGTGCAAAGGATCTTGTTAGAAGAATGCTTATAAGGGATCCTAAGAAGCGGCTGACAGCACATGAAGCTCTTTGCCATCCTTGGGTTCAGGTTAATGGTCTTGCTCCTGATAGGCCTCTTGATTCTGCTGTCCTATCTCGTTTGCAGCAATTCTCTGCCATGAATAAGCTTAAAAGGATTGCTATCCGAGTAATTGCTGAAAATATGTCTGAGGAGGAAATTGCAGGCCTAAAGGAAATGTTCAAGATGATAGACACAGATAATAGTGGACAGATCACTCTTGAGGAACTGAAAAGTGGTTTACAGAGAGTGGGTGCTTATCTAAAGGATTCTGAAATTGATTCATTAATGGAAGCCGCAGACATTGATAATAGTGGTACAATAGACTATGCTGAATTCATAGCAGCTATGCTTCATTTAAACAAGATCCAGAAGGAGGATCATCTCTATGCAGCCTTCGCATACTTTGACAAAGATGGGAGTGGGTACATTACACGAGATGAACTCCAACAAGCCTGTGAAAAGTTTGGTCTAAAAGATGTTCACCTAGACGATATAATACGTGAAGCTGACCGGGATAATGATGGACGAATTGATTACAATGAGTTTGTTGCAATGATGCAAGAAAGTGGTTTTGGCAGGGTACTATA 1817 0.4342 MGNNCVGPNASGHGFLHSVTGAVWKTRQPEDKLSPPKSSANENAGPNSSKDSNAAKPSDASKRSDGSKGSDAPMNQSTPPETVKISSAEVSHPPQPEKPVKPEAETGKPVKPDASANDQASNNADAGKPKKPTHIKRVSSVGLQIESVLGRKTGNIKEVYSLGRKLGQGQFGTTFLCVEKATGKEFACKTIAKRKLTTAEDVEDVKREIQIMHHLAGHPNVIQIVGSYEDAVAVHLVMELCAGGELFDRIIQRGHYTERKAADLARLIVGVVEAFHSLGVMHRDLKPENFLFVSQEEESVLKTIDFGLSMFFKPGETFTDVVGSPYYVAPEVLRKHYGAECDVWSAGVIIYILLCGVPPFWDETEQGIFEQVLKGELDFISEPWPSISEGAKDLVRRMLIRDPKKRLTAHEALCHPWVQVNGLAPDRPLDSAVLSRLQQFSAMNKLKRIAIRVIAENMSEEEIAGLKEMFKMIDTDNSGQITLEELKSGLQRVGAYLKDSEIDSLMEAADIDNSGTIDYAEFIAAMLHLNKIQKEDHLYAAFAYFDKDGSGYITRDELQQACEKFGLKDVHLDDIIREADRDNDGRIDYNEFVAMMQESGFGRVL 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02251 605 MobiDBLite consensus disorder prediction 68 89 - -
Bva13g02251 605 CDD STKc_CAMK 159 417 - -
Bva13g02251 605 ProSitePatterns Protein kinases ATP-binding region signature. 166 193 IPR017441 GO:0005524
Bva13g02251 605 Pfam EF-hand domain pair 536 597 IPR002048 GO:0005509
Bva13g02251 605 Pfam EF-hand domain pair 466 526 IPR002048 GO:0005509
Bva13g02251 605 CDD EFh 540 597 IPR002048 GO:0005509
Bva13g02251 605 ProSitePatterns EF-hand calcium-binding domain. 580 592 IPR018247 -
Bva13g02251 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Bva13g02251 605 MobiDBLite consensus disorder prediction 1 138 - -
Bva13g02251 605 ProSiteProfiles EF-hand calcium-binding domain profile. 533 568 IPR002048 GO:0005509
Bva13g02251 605 SUPERFAMILY EF-hand 458 597 IPR011992 -
Bva13g02251 605 Gene3D Phosphorylase Kinase; domain 1 162 245 - -
Bva13g02251 605 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 600 - -
Bva13g02251 605 SMART serkin_6 160 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02251 605 ProSiteProfiles EF-hand calcium-binding domain profile. 571 602 IPR002048 GO:0005509
Bva13g02251 605 Gene3D Transferase(Phosphotransferase) domain 1 246 423 - -
Bva13g02251 605 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Bva13g02251 605 MobiDBLite consensus disorder prediction 33 55 - -
Bva13g02251 605 SMART efh_1 465 493 IPR002048 GO:0005509
Bva13g02251 605 SMART efh_1 571 599 IPR002048 GO:0005509
Bva13g02251 605 SMART efh_1 501 529 IPR002048 GO:0005509
Bva13g02251 605 SMART efh_1 537 565 IPR002048 GO:0005509
Bva13g02251 605 Gene3D - 426 599 - -
Bva13g02251 605 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 39 600 - -
Bva13g02251 605 SUPERFAMILY Protein kinase-like (PK-like) 160 419 IPR011009 -
Bva13g02251 605 ProSiteProfiles Protein kinase domain profile. 160 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02251 605 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Bva13g02251 605 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Bva13g02251 605 Pfam Protein kinase domain 160 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02251 605 CDD EFh 466 526 IPR002048 GO:0005509
Bva13g02251 605 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
Bva13g02251 605 ProSitePatterns EF-hand calcium-binding domain. 546 558 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02251 Bva-Chr13 17362349 17368359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02251 1 604 EF-hand Containing Proteins AT2G38910 71.711 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva13g02251 Pkinase 9.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02251 K13412 - zju:107433607 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02251 13 17362349 17368359 Bva13g02251 13 17362349 17368359 ECH