Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02250 ATGAAAAGGGATGGAACAATCCCAAAGGAAAAACAAGCAGACAACAATATTGACAGCTCCTACGTACTATATATTGTGAATTCAAAGAAGTCATCTCCAAAAACAGCTTTCCTCTGGAAGGTCGTCTTCTACTTTTGCCAGAAACGtggTCGGGTGAGAATGGAGAAAGGGAATTCAGGTAGGTTGGCTCGAACGAAATCCGATCAGCTAGTGGAGTCGGTGGTGGCAGCTCTAAAGTCAACACCTTCAAGTGAATCTCTTGCGGCGGAGGGTGGTGGCGGAACCTTATCAAGGAAGTCGAGCCGGCGGTTTTCGCCGGGGCGCAGCGGAGGTGGCAGAAACACACACATTAGGAAGTCGAGGAGTGCTCAGATGAAGATAGAGTTGGATGAAGTGAGCAGTGGCGCGGCTCTTAGCCGAGCTTCAAGTGCCAGCTTGGGCctctccttctccttcacTGGCTTCAGTGTTCCTCCCGATGATATTGCTGACTCTAAGCCCTTCAGCGACGATGATATTCCGGAGGATATTGAAGCTGGAACTCATCATAAACCAAAGTTTCAGACAGAACCCACTTTGCCAATTTATCTCAAgTTCACGGATGTGATCCACAAGATAGTGATCAAAGGCATTACCTCAAGTGAGGAAAAGGAGATCTTGAATGGGATTACTGGTTCTGTGAATCCTGGAGAAGTTTTGGCTTTGATGGGTCCCTCAGGGAGTGGAAAGACTACCCTTTTAAATCTTCTTGGAGGCAGATTAAGAAACGCCGCCGTTCGGGGCTGTATTACTTACAATGACAGACCATATTCCAAGTTTCTAAAGAGCAGgATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAGAGAAACATTGACATATGCGGCCCGTTTAAGGTTGCCAAAGACATTAACAAAGGAGCAAAAAGAGAAACGAGCTTTAGATGTCATCTATGAGCTTGGTCTGGAGAGGTGCCAAGACACCATGATAGGTGGTTCGTTCGTTCGTGGAGTCTCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAgtgaaatcataattaatccTTCTCTTCTGTTTCTTGACGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTGAGGATAGTTCAGTTGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACGACAATACACCAACCATCAAGCAGACTGTTTCACAAGTTTGATAAGTTGATTCTTCTGGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGGATCAGAGGCAATGCTTTACTTCGAATCTATAGGGTGTTCTCCTCTTATTGCTATGAACCCAGCAGAGTTTTTGCTAGACCTTGCAAATGGAAATATCAATGATGTTTCTGTACCGTCTGAGTTAGAGGATAAAGTGCAAATGGGCAATGCAGAAACTGAAACACGAAATGGGAAACCATCACCGGCAGTTGTACATGAGTACTTGGTGGAGGCATATGAGACCCGAGTTgcagaaacagaaaagaaaaaactaatgGTTCCTCTCCCACTTGATGAAGAAGTGAAGTCTAAGGTTAGCTCCTCTAAAAGAGAGTGGGGTGCAAGCTGGTTTGAGCAATATTCCATATTATTTTGCAGAGGAATTAAAGAGAGGCGACATGACTATTTCAGCTGGTTGAGAATCACCCAAGTTCTCTCTACTGCAGTCATTTTAGGATTACTTTGGTGGCAGTCTGATGCTAAGACCCCAAAAGGCCTTCAAGATCAGGCGGggctacttttttttattgctgtCTTCTGGGGATTCTTTCCAGTTTTCACAGCAATATTTACATTTCCTCAAGAGAGAGCCATGCTGAATAAAGAAAGAGCAGCTGACATGTACAGACTAAGTGCATATTTTGTGGCTAGGACTACAAGTGACCTTCCATTAGACCTCGTACTGCCAGTACTTTTCCTTGTGGTCGTTTATTTCATGGCAGGTTTGAAACTCAGTGCAGGTCCATTTTTCCTCAGTATTCTCACAGTTTTCCTCTGCATCGTTGCAGCTCAGGGGCTTGGACTAGCCATTGGAGCTACACTAATGGACTTGAAAAGGGCAACAACCTTCGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAAAGTCCCAGTATTCATATCTTGGATCCGCTATATATCTTTCAACTATCACACTTACAAGCTTCTGCTCAAGGTTCAATATAAACACATGACCCCAAGCGTAAATGGGATGAGAAGTGACAGTGGTTTTACAGAGGTCGCAGCTCTAATAGCCATGGTTTTTGGTTACCGTTTTTTGGCTTACCTGTCTTTGAAACGGATGAAACTTCAATCTTG 2375 0.4295 MKRDGTIPKEKQADNNIDSSYVLYIVNSKKSSPKTAFLWKVVFYFCQKRGRVRMEKGNSGRLARTKSDQLVESVVAALKSTPSSESLAAEGGGGTLSRKSSRRFSPGRSGGGRNTHIRKSRSAQMKIELDEVSSGAALSRASSASLGLSFSFTGFSVPPDDIADSKPFSDDDIPEDIEAGTHHKPKFQTEPTLPIYLKFTDVIHKIVIKGITSSEEKEILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLRNAAVRGCITYNDRPYSKFLKSRIGFVTQDDVLFPHLTVRETLTYAARLRLPKTLTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGSEIIINPSLLFLDEPTSGLDSTTALRIVQLLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKGSEAMLYFESIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAETETRNGKPSPAVVHEYLVEAYETRVAETEKKKLMVPLPLDEEVKSKVSSSKREWGASWFEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFVARTTSDLPLDLVLPVLFLVVVYFMAGLKLSAGPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTFASVTVMTFMLAGGFFVKKVPVFISWIRYISFNYHTYKLLLKVQYKHMTPSVNGMRSDSGFTEVAALIAMVFGYRFLAYLSLKRMKLQS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02250 791 Pfam ABC transporter 220 371 IPR003439 GO:0005524
Bva13g02250 791 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 197 443 IPR003439 GO:0005524
Bva13g02250 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 431 IPR027417 -
Bva13g02250 791 SMART AAA_5 229 420 IPR003593 -
Bva13g02250 791 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 69 787 - -
Bva13g02250 791 Pfam ABC-2 type transporter 539 747 IPR013525 GO:0016020|GO:0140359
Bva13g02250 791 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 69 787 - -
Bva13g02250 791 MobiDBLite consensus disorder prediction 82 123 - -
Bva13g02250 791 Gene3D - 205 436 IPR027417 -
Bva13g02250 791 CDD ABCG_EPDR 194 425 - -
Bva13g02250 791 ProSitePatterns ABC transporters family signature. 343 357 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02250 Bva-Chr13 17351808 17359060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02250 213 457 Calmodulin-binding Proteins AT2G36910 28.514 8.84e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02250 K05681 - pop:7488069 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02311 04 21691779 21698370 Bva13g02250 13 17351808 17359060 BWGD
Bva13g02250 13 17351808 17359060 Bva13g02250 13 17351808 17359060 ECH