Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02241 ATGGGGAATAACTGTGTTGGGTCAAGAACTTCGAAAGTTAGATTATGTCCCCCTAATCCGTGTTCATTATGGTGGTCACGACAAACAAGATCATTTTCTCAAACCCGCAAAGGAATTGCTGACGCACCCAAGTCtgtgaaaaaagaccaaaatgcttCAACGGTTGTTCAGACTAAGCCTCCAGAAGTAATGAAAATTGCTAATGAGGAAAAAGGAACTAAATCTTCAGAACAAGTTACAAGGCAGGTGGAGGAGAGTAGATTACCAGAACAAGTTAGGGATAAGGAAGTGGCTAGGCCAGCTCCAACAACAAAACAAGAGAATAAAGCAGCAGCGCCTGCAAAACCAAAGGTAGCCCATACTGTCAAGAGGCTAGCAGCTGCTGGGCTTCAAACGGACTCAGTTTTGCGAAGGAAAACTGGTCATATTAAGGAGTACTATACTTTGGGAAGGAAGCTCGGAAATGGACAATTCGGAACCACTTTCCTATGTGTGGAGAAAAATACTGGAAAAGAGTATGCCTGCAAGTCCATTGCGAAGCGAAAATTGTTGACAGAAGATGATGTGGAGGATGTTAGGAGGGAGATTCAGATAATGCATCACTTGTCTGGGAATCAGGATATGATTTCAATCAAAGGGGCTTATGAGGATGCCGTTGCGGTTCATCTTGTGATGGAATTATGTGCAGGGGGTGAGCTCTTTGACAGGATCGTGGAAAGGGGGCATTATACAGAAAGGAAGGCAGCTAAACTTGCAAGGACTATAGTTAGTGTTATTGAAACTTGCCACTCCCTAGGAGTAATGCATCGTGATCTTAAGCctgagaattttctttttgttaatgaGCAAGAAGACTCCCCCCTTAAGGTTATAGACTTTGGACTATCTGTATTCTTCAAACCAGGAGAGATTTTCAATGATGTGGTGGGAAGCCCTTATTATGTCGCACCTGAAGTTCTGCGCAAGAGATATGGTCAAGAAGCAGATGTCTGGAGTGCTGGTGTGATGATTTACATTCTCTTATGCGGGGCGCCTCCATTTTGGGGTGAATCTgaggaagagatatttcacGAGGTCTTGCATGGTGACATTGATTTCTCATCAGATCCCTGGCCTAATATCTCAGAAGCTGCAAAAGACTTGGTTAGGAAGATGCTTGTTAGGGATCCAAAGAAACGGTTAACAGCCCATGAAGTTCTTTGTCACCCCTGGATTCAGGTCGATGGTGCAGCTCCTGACAAGCCTCTTGATTCTGCAGTTCTGACTCGCCTGAAGCAATTTTCTGCTATGGACAAGCTGAAGAAAATGGCTCTTAGGGTCATTGCAGAAAATCTCTCTGCGGAAGAAATTGCTGGACTGAAGGAAATGTTTAAGACGATAGACACGGACAACAGTGGTCAAATTACTTTTGAGGAACTCAAGGTTGgacttaaaaaatttggtgCTAACCTCAGTGAATCAGAAATTCACAATCTAATGCAAGCTGCAGATGTTGATAACAGTGGAACAATTGATTATGGAGAATTTATAGCTGCAACATTGCATTTAAACAAAGTGGGGAGAGAGGATCATTTATTTGCAGCTTTCTCTTATTTTGACAAAGATGGAAGTGGCTACATCACTCAAGATGAACTTCAAAAAGCTTGTGAGGAATTTGGCATAGAAGATGTCCGATTGGAAGAGATGATGCGAGAAGTTGATCAAAATAATGATGGGAGAATAGATTACAGTGAATTTGTGGCCATGATGCAGGGAGGCAATGCAGATATGGGTACGAAGGGTCAAAAGGGTAGTGGTAGTATTAGCGTGGGATTTAGGGAGGCCTTACCGGTATGTTA 1838 0.4146 MGNNCVGSRTSKVRLCPPNPCSLWWSRQTRSFSQTRKGIADAPKSVKKDQNASTVVQTKPPEVMKIANEEKGTKSSEQVTRQVEESRLPEQVRDKEVARPAPTTKQENKAAAPAKPKVAHTVKRLAAAGLQTDSVLRRKTGHIKEYYTLGRKLGNGQFGTTFLCVEKNTGKEYACKSIAKRKLLTEDDVEDVRREIQIMHHLSGNQDMISIKGAYEDAVAVHLVMELCAGGELFDRIVERGHYTERKAAKLARTIVSVIETCHSLGVMHRDLKPENFLFVNEQEDSPLKVIDFGLSVFFKPGEIFNDVVGSPYYVAPEVLRKRYGQEADVWSAGVMIYILLCGAPPFWGESEEEIFHEVLHGDIDFSSDPWPNISEAAKDLVRKMLVRDPKKRLTAHEVLCHPWIQVDGAAPDKPLDSAVLTRLKQFSAMDKLKKMALRVIAENLSAEEIAGLKEMFKTIDTDNSGQITFEELKVGLKKFGANLSESEIHNLMQAADVDNSGTIDYGEFIAATLHLNKVGREDHLFAAFSYFDKDGSGYITQDELQKACEEFGIEDVRLEEMMREVDQNNDGRIDYSEFVAMMQGGNADMGTKGQKGSGSISVGFREALPVC 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02241 612 Gene3D Phosphorylase Kinase; domain 1 149 232 - -
Bva13g02241 612 Gene3D Transferase(Phosphotransferase) domain 1 233 411 - -
Bva13g02241 612 Pfam EF-hand domain pair 465 515 IPR002048 GO:0005509
Bva13g02241 612 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Bva13g02241 612 ProSiteProfiles Protein kinase domain profile. 147 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02241 612 ProSiteProfiles EF-hand calcium-binding domain profile. 558 589 IPR002048 GO:0005509
Bva13g02241 612 SUPERFAMILY Protein kinase-like (PK-like) 145 406 IPR011009 -
Bva13g02241 612 SMART efh_1 524 552 IPR002048 GO:0005509
Bva13g02241 612 SMART efh_1 558 586 IPR002048 GO:0005509
Bva13g02241 612 SMART efh_1 488 516 IPR002048 GO:0005509
Bva13g02241 612 SMART efh_1 452 480 IPR002048 GO:0005509
Bva13g02241 612 Pfam Protein kinase domain 147 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02241 612 Gene3D - 412 586 - -
Bva13g02241 612 ProSiteProfiles EF-hand calcium-binding domain profile. 520 555 IPR002048 GO:0005509
Bva13g02241 612 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 86 594 - -
Bva13g02241 612 ProSitePatterns EF-hand calcium-binding domain. 533 545 IPR018247 -
Bva13g02241 612 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Bva13g02241 612 MobiDBLite consensus disorder prediction 35 118 - -
Bva13g02241 612 SMART serkin_6 147 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02241 612 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Bva13g02241 612 MobiDBLite consensus disorder prediction 64 102 - -
Bva13g02241 612 Pfam EF-hand domain pair 523 584 IPR002048 GO:0005509
Bva13g02241 612 SUPERFAMILY EF-hand 444 584 IPR011992 -
Bva13g02241 612 ProSitePatterns Protein kinases ATP-binding region signature. 153 180 IPR017441 GO:0005524
Bva13g02241 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Bva13g02241 612 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Bva13g02241 612 ProSitePatterns EF-hand calcium-binding domain. 567 579 IPR018247 -
Bva13g02241 612 PANTHER SERINE/THREONINE-PROTEIN KINASE 86 594 - -
Bva13g02241 612 CDD STKc_CAMK 147 404 - -
Bva13g02241 612 CDD EFh 524 584 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02241 Bva-Chr13 17308498 17312865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02241 1 606 EF-hand Containing Proteins AT3G10660 64.253 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva13g02241 Pkinase 4.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02241 K13412 - cpap:110806378 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02241 13 17308498 17312865 Bva04g02318 04 21729832 21733474 BWGD
Bva13g02241 13 17308498 17312865 Bva13g02241 13 17308498 17312865 ECH