Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02233 ATGGGGCGAGTCCGCACAAAGACGGTAAAGAAATCATCGCGGCAAGTGATCGAGAGGTACTACTCTCGGATGACATTGGATTTCCATACGAATAAGAAGATCCTTGAAGAGGTGGCTTTGATTCCTTCTAAGAGACTTCGGAACAAGATCGCTGGTTTCTCGACTCACCTCATGAAGAGGATCCAGAAGGGCTCCGTTCGTGGAATCTCCCTGAAGCTGCAGGAGGAGGAGCGTGAGCGGCGCATGGATTTTGTTCCTGATGTCTCGGCAATAAAAACTGAGCAGATTGAGGTTGACAAGGAGACTCTTGATATGCTCAGCGCTCTTGGCATGTCTGAAATTCCTGGCCTCGTTCAAGTTGACCCAACACCTGTGCAGCCGCAGTTTGGCCGTGGTGGTTTCGGTGGACCCGGCAGGAGGTATTA 425 0.5106 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETLDMLSALGMSEIPGLVQVDPTPVQPQFGRGGFGGPGRRY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02233 141 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bva13g02233 141 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva13g02233 141 MobiDBLite consensus disorder prediction 120 141 - -
Bva13g02233 141 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva13g02233 141 PANTHER 40S RIBOSOMAL PROTEIN S17 1 141 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva13g02233 141 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bva13g02233 141 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Bva13g02233 141 PANTHER 40S RIBOSOMAL PROTEIN S17 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02233 Bva-Chr13 17283898 17284611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02233 1 141 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 78.723 1.83e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02233 K02962 - csv:101204345 232.261