Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02204 ATGAACCTCCCAGCACCCTCCATGGAAGACCGTTTTCTCAAGCTTAAACTAGTGCTCTTTCTGTCACTTGCTGCAGTTGTTTCCAGTGACACAGACCCTCATGATGTTGATATTCTCCACCAATTCAGAAAAGGATTGAACAACCCGGAGCTGTTGCCGTGGCCTGATGCTGGCGGAGACCCATGTGGCAATCCTAACTGGCAGTACATCTACTGCAAGGGCAACAGAGTGACCCAGATTCAGGCTAAGGACTTGAACTTGAGTGGTCCTCTACCTCAGAATATGAACCAGCTCTCTGAGCTAGTAAATATTGGCCTTCAGAACAATAAATTGAACGGGCCATTACCGTCTTTCAGCGGGTTGTCCAAATTGCAATATGCATATCTGGATAACAACCAGTTCGATTCCATTCCAGCTGATTTCTTCGATGGGCTTCAGAGTCTAGAGGTTTTGGCATtggatgaaaataatttcaatgctAGTACTGGATGGCAATTTCCCCCTAATTTGCAGGATTCCACTCAGTTAAGGAATCTTTCTTGTATGAGTTGCAACTTGGCTGGTAAATTGCCGGATTTTCTGGGAAAGATGTCATCTTTAACTGTCCTTAAGCTTTCAAACAACAATTTAACCGGTGAAATTCCACAAACTCTCAACGGCAcgaatttacaaattttgtgGTTGAATAATCAGCAGGGTGATGGTCTCAGTGGTCCTATTGACATTGTGGCAACGATGACTTCGCTTACGAGTGTCTGGCTTCATGGGAATCGTTTCACAGGGTCCATTCCAGAGAACATTGGGGTTTTAACTCTTCTGAAGGATCTCAATCTCAATGGTAACCAACTCGTTGGCTTAATCCCAAAAGCTTTAGCTGACATGCAATTGGACCATCTAGAATTGGACAATAACAACCTAATGGGTCCAATCCCAGATTTCAAAGCAGCTAAATTCACTTACGGTGCGAATGATTTTTGTCAACCCAAGGAGGGGGCTCCTTGCGCCCCGGAAGTCACAGCACTCTTGGAATTTCTCGGAGGGTTGAAGTATCCTTTGAATTTAGTTCGAGTTTGGTCTGGTAATGACCCATGTACCCAGTGGTTGGGAATAAAGTGCAATTCCAATGGAAAGGTATCTATGATTAATTTACAAAAGTTTAATCTTTCTGGTAGTTTAAGTCCTTCGGTTGCAAAATTAGATTCTCTAGTTGAAATCAGGTTATCAGGTAACAATCTGAGCGGCCAAATACCTAGTAACTGGACTAGCTTGAAATCTCTCACATTATTGGATCTAAGTGACAATGACATTTCCCCTCCATTGCCACAGTTTAGTAATAGcaatttcaaacttttaacTGGCGGAAATCCTCTACTAAATGTTGATTCGAAAACCCCTCCATCAGGGAACAGCCCATCATCTGGGAATGACCAACCTTCACCTGATTCTCCATCAGAACACTCAAGTTCCAAATCCAATAATACTCTTGAACAAGAAAAATCCAACAGGAAAATTTTGGTTGCTGTTATAGGTCCCGTTGCAGGTATTGTTGCTGCAGCTTTTCTGTTCATTCccctgtatatatattgtcgCAAGGGAAGAAAAGATACTCCCCAAGCTCCAAGTTCACTAGTAATTCACCCCAGAGATCCATCTGATTCAGACAATATGGTAAAGATTGTTGTTGCTAACAATACAAATGGAAGCATTTCCGCAGTAACAGGTAGTGGGTCTGGTACCAGAAATAGCAGTGGAATTGGCGAATCTCATGTTATTGAAGCTGGAAATCTTGTGATATCTGTTCAAGTTCTTAGAAATGTGACGAAGAATTTTGCTCCCGAGAATGAGCTTGGCCGTGGTGGATTTGGGGTTGTTTACAAGGGAGAATTGGATGATGGAACTAAAATAGCTGTAAAAAGAATGGAAGGTGGCGTGATTAGTACTAAAGCCTTGGATGAATTCCGATCTGAAATTGCGGTTTTATCAAAAGTCAGACACCGCCATCTAGTGTCTCTTTTGGGTTATTCTGTTGAAGGCAATGAGAGAATCCTAGTTTATGAGTATATTCCACAAGGAGCTCTCAGTAAGCATCTTTTTCATTGGAAGAGCTTAAATCTGGAACCTCTTTCTTGGAAGAGGAGGCTCAATATTGCCTTGGATGTAGCTAGAGGGGTGGAGTATCTACATAGTCTGGCTCATCGGAGCTTCATACACAGAGATCTAAAGTCATCAAATATTTTGCTTGGGGATGATTTTAGAGCAAAAGTCTCAGACTTTGGATTGGTGAAGCTTGCTCCTGATGGTGAAAAATCTGTGGTGACCCGGCTTGCTGGGACTTTTGGATACTTGGCGCCTGAGTATGCAGTGACGGGAAAAATCTCAATCAAAGTAGATGTTTTTAGTTTTGGGGTTGTGCTGATGGAGCTACTGACTGGATTGATGGCCCTTGATGAGAATAGACCTGAGGAAAGCCAATACTTGGCGGCATGGTTCTGGCATATAAAGTCAGATAAAGAGAAACTTATGGCTGCTATTGACCCAGTCCTTGACAGAAAGGAAGAAACGTTTGAAACCATCTCCGTCATTGCTGAGCTAGCTGGACACTGCACTGCAAGAGAACCAAACCAGCGGCCAGATATGGGCCATGCTGTGAATGTCTTATCTCCCCTTGTTGAAAAATGGAAACCATTTGATGATGACTCAGAGGAGTATTCTGGCATTGACTATAGCCTGCCCCTTACCCAGATGGTGAAGGGATGGCAGGAAGGAAAGGACTTAAGCTACATGGACCTAGATGACAGTAAGAGTAGCATCCCTGCAAGGCCTACTGGATTTGCCGATTCTTTTACTTCTGCAGATGGTCGGTG 2864 0.4228 MNLPAPSMEDRFLKLKLVLFLSLAAVVSSDTDPHDVDILHQFRKGLNNPELLPWPDAGGDPCGNPNWQYIYCKGNRVTQIQAKDLNLSGPLPQNMNQLSELVNIGLQNNKLNGPLPSFSGLSKLQYAYLDNNQFDSIPADFFDGLQSLEVLALDENNFNASTGWQFPPNLQDSTQLRNLSCMSCNLAGKLPDFLGKMSSLTVLKLSNNNLTGEIPQTLNGTNLQILWLNNQQGDGLSGPIDIVATMTSLTSVWLHGNRFTGSIPENIGVLTLLKDLNLNGNQLVGLIPKALADMQLDHLELDNNNLMGPIPDFKAAKFTYGANDFCQPKEGAPCAPEVTALLEFLGGLKYPLNLVRVWSGNDPCTQWLGIKCNSNGKVSMINLQKFNLSGSLSPSVAKLDSLVEIRLSGNNLSGQIPSNWTSLKSLTLLDLSDNDISPPLPQFSNSNFKLLTGGNPLLNVDSKTPPSGNSPSSGNDQPSPDSPSEHSSSKSNNTLEQEKSNRKILVAVIGPVAGIVAAAFLFIPLYIYCRKGRKDTPQAPSSLVIHPRDPSDSDNMVKIVVANNTNGSISAVTGSGSGTRNSSGIGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEGGVISTKALDEFRSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYIPQGALSKHLFHWKSLNLEPLSWKRRLNIALDVARGVEYLHSLAHRSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYAVTGKISIKVDVFSFGVVLMELLTGLMALDENRPEESQYLAAWFWHIKSDKEKLMAAIDPVLDRKEETFETISVIAELAGHCTAREPNQRPDMGHAVNVLSPLVEKWKPFDDDSEEYSGIDYSLPLTQMVKGWQEGKDLSYMDLDDSKSSIPARPTGFADSFTSADGR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02204 954 Gene3D Phosphorylase Kinase; domain 1 574 687 - -
Bva13g02204 954 SUPERFAMILY L domain-like 31 313 - -
Bva13g02204 954 CDD STKc_IRAK 616 889 - -
Bva13g02204 954 PANTHER OSJNBA0070M12.3 PROTEIN 14 954 - -
Bva13g02204 954 SMART serkin_6 610 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02204 954 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 14 954 - -
Bva13g02204 954 MobiDBLite consensus disorder prediction 455 497 - -
Bva13g02204 954 Gene3D Transferase(Phosphotransferase) domain 1 688 906 - -
Bva13g02204 954 SUPERFAMILY Protein kinase-like (PK-like) 586 886 IPR011009 -
Bva13g02204 954 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
Bva13g02204 954 Gene3D Ribonuclease Inhibitor 32 331 IPR032675 -
Bva13g02204 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Bva13g02204 954 ProSiteProfiles Protein kinase domain profile. 610 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02204 954 SUPERFAMILY L domain-like 336 448 - -
Bva13g02204 954 Gene3D Ribonuclease Inhibitor 336 459 IPR032675 -
Bva13g02204 954 MobiDBLite consensus disorder prediction 930 954 - -
Bva13g02204 954 SMART LRR_typ_2 246 268 IPR003591 -
Bva13g02204 954 SMART LRR_typ_2 145 168 IPR003591 -
Bva13g02204 954 SMART LRR_typ_2 399 422 IPR003591 -
Bva13g02204 954 SMART LRR_typ_2 121 144 IPR003591 -
Bva13g02204 954 SMART LRR_typ_2 270 293 IPR003591 -
Bva13g02204 954 SMART LRR_typ_2 197 220 IPR003591 -
Bva13g02204 954 SMART LRR_typ_2 423 447 IPR003591 -
Bva13g02204 954 Pfam Protein tyrosine and serine/threonine kinase 613 884 IPR001245 GO:0004672|GO:0006468
Bva13g02204 954 Pfam Leucine rich repeat N-terminal domain 336 373 IPR013210 -
Bva13g02204 954 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02204 Bva-Chr13 17137919 17141801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02204 87 924 Receptor kinase-like Gene Family AT1G55610 29.463 4.72e-77 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva13g02204 PK_Tyr_Ser-Thr 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02204 - - gmx:100305366 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02204 13 17137919 17141801 Bva13g02204 13 17137919 17141801 ECH