Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02162 ATGGAAGATATGCCGCCGGGTTACCGTTTCTACCCGACCGAAGAGGAGCTGGTTTCATTCTATCTGCGTAATAAGCTGGATGGAGCAGAGAGGGAGGACATGAACCGGATCGTACCTGTGCTTGATATTTACGATTACAACCCTTGGGATCTCCCTCaggTTTCGGGAGTGGCGAATCTGAGAGACACTGAGCAAtggttcttttttattccGCGGCAGGAAAGTGAAGCCCGTGGGGGAAGGCCGAAGCGGCTCACTACTAGCGGGTACTGGAAGGCGACGGGATCTCCGAGTCATGTTTATTCTTCTGATAATCGCATAATCGGCATGAAGAGAACCATGGTTTTCTACAATGGAAGAGCCCCGTCCGGAAAGAAAACCGATTGGAAGATGAATGAATACAAGGCCATTAAACATGAAACCTCTTCTTCAACTACGGCACCTCCTGTGTTGAGTCAGGAATTCAGTTTATGCCGAGTTtacaagaaatcaaaatgCGTAAGGGCATTTGATAGAAGGCCACCACCGAGGAAGGACTATCctaggggtagtggtagcactACTCATCGGGAGGGTTCCACTTCTTatcctaataataataatgaagatGCGCAGAGAGCGAGCTCATCAGAGAGTTTATCATCTGGAGAACATGGTCAACCCTCTCACAGCAGCCAAATAGATATCGAGAGGAATGAACCTTTGTTGGACTGGGACCATCTGGATTGGTTCTTGGGATCTGATCAACCATG 752 0.4428 MEDMPPGYRFYPTEEELVSFYLRNKLDGAEREDMNRIVPVLDIYDYNPWDLPQVSGVANLRDTEQWFFFIPRQESEARGGRPKRLTTSGYWKATGSPSHVYSSDNRIIGMKRTMVFYNGRAPSGKKTDWKMNEYKAIKHETSSSTTAPPVLSQEFSLCRVYKKSKCVRAFDRRPPPRKDYPRGSGSTTHREGSTSYPNNNNEDAQRASSSESLSSGEHGQPSHSSQIDIERNEPLLDWDHLDWFLGSDQP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02162 250 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Bva13g02162 250 MobiDBLite consensus disorder prediction 169 231 - -
Bva13g02162 250 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Bva13g02162 250 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 243 - -
Bva13g02162 250 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Bva13g02162 250 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 243 - -
Bva13g02162 250 SUPERFAMILY NAC domain 3 163 IPR036093 GO:0003677|GO:0006355
Bva13g02162 250 MobiDBLite consensus disorder prediction 169 185 - -
Bva13g02162 250 MobiDBLite consensus disorder prediction 186 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02162 Bva-Chr13 16908989 16910246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02162 2 243 NAC Transcription Factor Family AT5G22380 49.587 1.61e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva13g02162 NAM 3.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02162 - - gmx:100777948 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02162 13 16908989 16910246 Bva13g02162 13 16908989 16910246 ECH