Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02142 ATGATGAATTCAAGAACCCGCGCTCCCTCGCGCTCTCTCCTTTTATCCGTTGAAGCATCTCCTTGCCATAGCCGCTTCGTCTTCTCGCAATTTGCATTGAATCAGTATATGGATACGTCGAATCCTGCGGCCTTTGTTAATGGAGAACTCTTACGCTTTTATGTAGGACGGAGGGTTCGGGCAGTGATACAGATTATTCGATCTGATAGTGGTAGTGTAATTGGAAAATCAACAGATGAGAAGCAGCTAGTTGTAAAAGGCTTGCCCCCACCTAcccctcttacaaattttgtgGAAGTTATTGGTGTTGCTGACAGTGATAAATCCATCCATGCCGAGATATGGACCAATTTTGGTGATACAATTGATACCTTCAGTTATAATAAACTTTGCCAACTTGCAAACGGAGAATTTAAACACTTGTTCCTGTA 431 0.4084 MMNSRTRAPSRSLLLSVEASPCHSRFVFSQFALNQYMDTSNPAAFVNGELLRFYVGRRVRAVIQIIRSDSGSVIGKSTDEKQLVVKGLPPPTPLTNFVEVIGVADSDKSIHAEIWTNFGDTIDTFSYNKLCQLANGEFKHLFL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02142 143 Pfam Replication factor A protein 3 37 139 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bva13g02142 143 CDD RPA3 42 142 - -
Bva13g02142 143 Gene3D - 36 143 IPR012340 -
Bva13g02142 143 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 35 143 - -
Bva13g02142 143 SUPERFAMILY Nucleic acid-binding proteins 41 142 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02142 Bva-Chr13 16820060 16823099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02142 37 143 Core DNA Replication Machinery Family AT4G18590 69.159 2.48e-54 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02142 K10740 - vvi:100264936 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02142 13 16820060 16823099 Bva13g02142 13 16820060 16823099 ECH