Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02112 ATGCACCAAGGTTCTTTCCCTTCCATTCTTATCCCCTTACGCCTCGCCTCGCATCCTCCTCAACTGCTTCTTGCCATTTTTGAGActcccttctcttctcttctcatcATCAATCGgGTCAAGGGTTCTTTGATCGAGATTTACACAGTGAAGCGCAGATCCAGACACAGAGAGAACGATATGGCAGAAGAGCACCGTTGCCAAGCCCCCGAAGGTCACCGACTCTGCTCCAATAACTGCGGCTTCTTAGGTAGCCCGGCCACCATGAACCTTTGTTCCAAATGCTACAGAGATTTCCGTCTTAAAGAACAACAAGAAGCCTCTACCAAATCCACCATCGAAGCCGCTCTCACCATCCCTGCTCCTCAGCCTTCGTCAACGCCATCGGCGTTGCCGCCCATCGAATCTCCGCCTCCTCCTCCGTCGTTGACGTTGACGGAGGTTTCTGTAGAACCACCGAGCTCGGCATCTGTGGCCGCGGGACCGGATAGAACGACAGCACAGCCGAATCGATGCGCGTCCTGCCGGAAGCGGGTCGGGCTTACCGCGTTCAAGTGCAAGTGCGGTGTCACGTTCTGCGGGGTCCACAGGTACCCGGAGAAACACGGGTGTGGCTTCGATTTTAAGAAAGTGGGGCGAGAGGAAATAGCTCGGGCAAATCCCATGATCAAAGCTGATAAgctgaataaaattta 695 0.5151 MHQGSFPSILIPLRLASHPPQLLLAIFETPFSSLLIINRVKGSLIEIYTVKRRSRHRENDMAEEHRCQAPEGHRLCSNNCGFLGSPATMNLCSKCYRDFRLKEQQEASTKSTIEAALTIPAPQPSSTPSALPPIESPPPPPSLTLTEVSVEPPSSASVAAGPDRTTAQPNRCASCRKRVGLTAFKCKCGVTFCGVHRYPEKHGCGFDFKKVGREEIARANPMIKADKLNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02112 231 SUPERFAMILY AN1-like Zinc finger 161 226 IPR035896 -
Bva13g02112 231 Pfam A20-like zinc finger 74 97 IPR002653 GO:0003677|GO:0008270
Bva13g02112 231 SMART A20_3 73 97 IPR002653 GO:0003677|GO:0008270
Bva13g02112 231 SMART AN1_Zf_4 172 209 IPR000058 GO:0008270
Bva13g02112 231 ProSiteProfiles Zinc finger A20-type profile. 70 104 IPR002653 GO:0003677|GO:0008270
Bva13g02112 231 ProSiteProfiles Zinc finger AN1-type profile. 166 212 IPR000058 GO:0008270
Bva13g02112 231 MobiDBLite consensus disorder prediction 117 169 - -
Bva13g02112 231 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 75 116 - -
Bva13g02112 231 PANTHER AN1-TYPE ZINC FINGER PROTEIN 61 231 - -
Bva13g02112 231 Gene3D - 148 227 IPR035896 -
Bva13g02112 231 MobiDBLite consensus disorder prediction 147 169 - -
Bva13g02112 231 Pfam AN1-like Zinc finger 172 208 IPR000058 GO:0008270
Bva13g02112 231 MobiDBLite consensus disorder prediction 125 146 - -
Bva13g02112 231 Gene3D - 59 118 - -
Bva13g02112 231 PANTHER BNAC06G14100D PROTEIN 61 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02112 Bva-Chr13 16683395 16684963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02112 61 231 C2H2 Transcription Factor Family AT3G52800 56.571 5.17e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02112 - - csv:101211758 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02437 04 22315746 22316261 Bva13g02112 13 16683395 16684963 BWGD
Bva13g02112 13 16683395 16684963 Bva13g02112 13 16683395 16684963 ECH