Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02104 ATGTCCCTAAAAGCAAAGAGGAAATCCAACAAAGAGAGCGATATCATTGTGGGTCTGCTGGACACAGGAATCTCCATGGCTTGCCCCAGTTTCAACGATAAAGGGTATGGCCCTCCTCCAAGCAGATGGAAGGCCAAGTGTGATACGGGGGTTAACTTCACCGGTTGCAACAACAAGGTGATAGGAGCAAAATACTTCAAACTGGACAGAATGGATCCCCTCGTTAGACTTCCAAGTCCTGCAGATTATCAGGGCCATGGCACTCACACAGCCTCCACGTTGGCCGGTGCTCCGGTGGAGGGCGCTAGCCTATTTAACATCGGCAAAGGCACCGTACGCGGTGGCGTCCCATCTGCCCGAATTGCCATGTACAAAGTTTGCTGGGACTCTGGCTGCAACGAGATGGACCTCTTGGCTGGCTTTGATGAAGCCATTGCCGACGGCGTTGACTTCTTATCTGTGTCCATAGGTGGGGTACCTAGAAGCTTCTTCGTTGATCCAATTGCAATTGGATCATTTCATGCTATGAAGAGAGGCATTCTAACTTCTTGCTCAGCTGGGAATAAAGGTCCTTCCCTTATGTCAATTCAGAATGTTGCTCCTTGGATTTTGACGGTGGCAGCTTCCGGCACCGATAAGCAGTTTGCCACCCCATTTGCCCTCGGCAATGGCAAGAATGCTACAGGACTATCCATTAATACCTTTacaccaaagaaaaagatgtaTCCTTTGCTTAATGGAGCCCTTGGTGCCAACGCCACTGGATATAAGTATGGCAATTACAGTTCTTGTGATTATGGAACTCTAGACCCGAACAAGGTGAAGGGAAGAATCGTGTACTGCCTAGGAGCAGACTTTATTGATCAGGACAGTATCATAGCAGAAACAGGTGCTACAGGTTTCATCATGGGACTTAGTAAAAAACCAGTTATGTCCTACACCACCATTATTGCAGCAACCTTTGTCGATGCCTTTACTGTGGGAAAAAATATCAACGACTATATCAATTCAACTAAgaATCCTCAAGCTGTTATATACAAGACAAAAAGGGTAAGAGTCCCTGCACCATTTGTTGCTTCTTTCTCATCCAGAGGACCTCAAGTTACGTCCCGCAACATTCTCAAGCCTGACATAACTGCTCCGGGACTGAACATTCTGGCCGGTTTTTCCAAACTGGCTTCACTTACAGGGTACGATGAAGACGACCGCCATGAAAACTTCAACATAATATCAGGAACATCCATGGCTTGCCCACATGTTGCTGCAGCTGCTACTTATGTCAAGTCCTTTCATCCTGACTGGTCTCCTGCTGCAATTAAATCCGCTCTTATGACCACTGCCACTCCTATGCTAatcaaagaagatgaagcagAGCTGGGATATGGGTCAGGACAGGTTAACCCAACAAGAGCAGTGAATCCTGGTCTAGTTTACGACATGGGAATGAGCTCGTATCTTGGTTTCCTATGCAAGCAAGGATACAACAGCAGCGACATTGGTCTTCTCCTTGGCAACAAAAGGTTCAATTGCTCCAACATTAAGATTCTACCAGGGGCTGATGGACTCAATTACCCCACCATGTATTTCCATCTCTTGAATGCGAATTCTCGTATTTCGGCAGTGTTTTGTAGAACAGTAAGAAATGTTGGATATGGAAATTCAACGTACAATGCTAGACTCACATTGCCCAAGGGCCTAACCGCTGAGGTTATTCCGAATACAATGAAGTTCACTCATGTGCACCAAAAGCAGTCGTTCAAGGTTGTCGTCAATGGGCCTCCAATGTCAAATGGGACGTACATACTGTCCGCGTTACTTGAATGGAATGACTCAAAACATAGCGTCAGAACTCCTATTGTTGTCTTCAGATCAATGGACCAGTCTCATTG 1889 0.4547 MSLKAKRKSNKESDIIVGLLDTGISMACPSFNDKGYGPPPSRWKAKCDTGVNFTGCNNKVIGAKYFKLDRMDPLVRLPSPADYQGHGTHTASTLAGAPVEGASLFNIGKGTVRGGVPSARIAMYKVCWDSGCNEMDLLAGFDEAIADGVDFLSVSIGGVPRSFFVDPIAIGSFHAMKRGILTSCSAGNKGPSLMSIQNVAPWILTVAASGTDKQFATPFALGNGKNATGLSINTFTPKKKMYPLLNGALGANATGYKYGNYSSCDYGTLDPNKVKGRIVYCLGADFIDQDSIIAETGATGFIMGLSKKPVMSYTTIIAATFVDAFTVGKNINDYINSTKNPQAVIYKTKRVRVPAPFVASFSSRGPQVTSRNILKPDITAPGLNILAGFSKLASLTGYDEDDRHENFNIISGTSMACPHVAAAATYVKSFHPDWSPAAIKSALMTTATPMLIKEDEAELGYGSGQVNPTRAVNPGLVYDMGMSSYLGFLCKQGYNSSDIGLLLGNKRFNCSNIKILPGADGLNYPTMYFHLLNANSRISAVFCRTVRNVGYGNSTYNARLTLPKGLTAEVIPNTMKFTHVHQKQSFKVVVNGPPMSNGTYILSALLEWNDSKHSVRTPIVVFRSMDQSH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02104 629 PANTHER CUCUMISIN PROTEIN 6 625 - -
Bva13g02104 629 ProSitePatterns Serine proteases, subtilase family, serine active site. 412 422 IPR023828 -
Bva13g02104 629 PRINTS Subtilisin serine protease family (S8) signature 82 95 IPR015500 -
Bva13g02104 629 PRINTS Subtilisin serine protease family (S8) signature 12 31 IPR015500 -
Bva13g02104 629 PRINTS Subtilisin serine protease family (S8) signature 411 427 IPR015500 -
Bva13g02104 629 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 625 IPR045051 -
Bva13g02104 629 Pfam Subtilase family 13 461 IPR000209 GO:0006508|GO:0008236
Bva13g02104 629 ProSiteProfiles Serine proteases, subtilase domain profile. 1 472 - -
Bva13g02104 629 CDD Peptidases_S8_3 8 448 IPR034197 -
Bva13g02104 629 Gene3D - 212 351 - -
Bva13g02104 629 Gene3D - 489 623 - -
Bva13g02104 629 SUPERFAMILY Subtilisin-like 9 476 IPR036852 GO:0004252|GO:0006508
Bva13g02104 629 Gene3D Peptidase S8/S53 domain 14 485 IPR036852 GO:0004252|GO:0006508
Bva13g02104 629 Pfam Fibronectin type-III domain 522 621 IPR041469 -
Bva13g02104 629 CDD PA_subtilisin_like 221 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02104 Bva-Chr13 16637498 16640125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02104 4 446 Subtilisin-like Serine Gene Family AT5G03620 60.222 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02104 - - gmx:100793716 832.017