Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02103 ATGCCCATGGAATCAGAGAAGCGCCGTGCGTCGAGCCCTTCTTCTTCGCCTCCGTGGCCGCAAAGATTGGGCGGCGACACGGATCGGTTGGTGAAGACTGAGATTGAAGCGGCGGAGACTCTCGTTGATTTGGCACAGTTGGCGATGAGTCACGCTTCCTCTTACACCGGTGATAAATGttggaagaaaggaaaacGAGGTAGGAGGCCCTTCGCACGCGAGTCACCGACTCCTGACTCGCCTTTCAACGTGCTTTCCTCGCCGTCTACATGTCCGGATCTCTCTGCGGGCCAAGCTGTTGTAGGTAGTCAACTGCATCAAAAAGTGTGCCTAAGTAAATCCATAGATCCCGAAATGGTGCGCCAGGATGTATGCGAGAAACAAGTGAAGGTGGAGCAGGATGCTGATTTACCCAAGACTAGCACCTCAAGTACAACAAATTACGCTTCAGTTGGTTGCAACAAGCCTAGGCGTAATTTAACCGAGATTTCCATtcaggaagaaaaggaagcacGGAGGATACGCAGGGTATTGGCAAACAGAGAGTCAGCAAGGCAGACAATTCGCCGTAGGCAGGCTCTTTGTGAGGAGTTAACCAGAAAAGCTGCCAATTTAGCCCTGGAAAATGAAAACCTAAAGAGGGAGAGGGAGTTGGCTTTGAAAGAGTATCAGTCCTTGGAGACCACAAATAAGCAGTTAAAGGAACAAGTAGCCAAGTCAATAAATACTGAAACGGAGAAAACTCCAGTTCAGCGTGAGTCACCTGTGGTTGAGATGACCAATTCTTTACCCACTAACTCTCCGTGGTTCTTGTATAACCATTTTCCAGTTACACAGTTCATTTGGCCCCCAATGATTCAGTCCTCCCACCCTGTACAATTACACCATAGACCACATAGTTCCGTTGTCATTCCGTCAAATGTTTCTTTGCCATGTTCCTCTGAGTCCGACTCGTGCCATGAACAAAAGGTAAATGACAATCAAACACAAAATCCATTGTACATGTTACCATGTCCTTGGTTTTTTCCACTTCCGGAGTTTGGAAATGGTCAACATCCGGCGTCCATTGGCCAAAAGGATAAACACGATGGACGTCCGGTAGATAAACAATATAGTACCAGTTCATCTTTGAATACCACGGCAGATGTAGATAATCACACTGCCCTACCTATCAAACTTAAAACAGAAACTTCTAGCTTCGTAGAAGCCAGACATAGTAATGAACCTAATGATGATTCTCCTAGGTTTTCTTCAGATAGAGGTGAAGAGAAAACAGGATCtcatatttttgaaagatttcATAGACCATCATCTTTTAGTTACGTTGGTCATACCTCTACTATCAAGTGTGAAAATGGGGATCAGTCACATTCTTCTCCCAATGATAAGGTATCTTCAACAGCTTCTCATATTGCAAGTTCTTTGctggaaaagaaacaaaagcacGTCATATGCACAGGTAAAAATCTAGTGGATGCTGTTGCTGCAGCAGAGGCAAGAAAGCGGAGAAAGGCACTTACAAAGCTAAAAAGCACCCATGGCCGCCAATGTCGGATGCACCGTTG 1565 0.4383 MPMESEKRRASSPSSSPPWPQRLGGDTDRLVKTEIEAAETLVDLAQLAMSHASSYTGDKCWKKGKRGRRPFARESPTPDSPFNVLSSPSTCPDLSAGQAVVGSQLHQKVCLSKSIDPEMVRQDVCEKQVKVEQDADLPKTSTSSTTNYASVGCNKPRRNLTEEEKEARRIRRVLANRESARQTIRRRQALCEELTRKAANLALENENLKRERELALKEYQSLETTNKQLKEQVAKSINTETEKTPVQRESPVVEMTNSLPTNSPWFLYNHFPVTQFIWPPMIQSSHPVQLHHRPHSSVVIPSNVSLPCSSESDSCHEQKVNDNQTQNPLYMLPCPWFFPLPEFGNGQHPASIGQKDKHDGRPVDKQYSTSSSLNTTADVDNHTALPIKLKTETSSFVEARHSNEPNDDSPRFSSDRGEEKTGSHIFERFHRPSSFSYVGHTSTIKCENGDQSHSSPNDKVSSTASHIASSLLEKKQKHVICTGKNLVDAVAAAEARKRRKALTKLKSTHGRQCRMHR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02103 517 Pfam bZIP transcription factor 164 226 IPR004827 GO:0003700|GO:0006355
Bva13g02103 517 MobiDBLite consensus disorder prediction 347 379 - -
Bva13g02103 517 CDD bZIP_plant_GBF1 169 220 IPR045314 GO:0003700|GO:0006355
Bva13g02103 517 SMART brlzneu 164 228 IPR004827 GO:0003700|GO:0006355
Bva13g02103 517 PANTHER G-BOX-BINDING FACTOR 3-RELATED 8 511 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bva13g02103 517 MobiDBLite consensus disorder prediction 52 89 - -
Bva13g02103 517 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 229 IPR004827 GO:0003700|GO:0006355
Bva13g02103 517 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 8 511 - -
Bva13g02103 517 MobiDBLite consensus disorder prediction 365 379 - -
Bva13g02103 517 SUPERFAMILY Leucine zipper domain 168 223 IPR046347 GO:0003700|GO:0006355
Bva13g02103 517 MobiDBLite consensus disorder prediction 394 424 - -
Bva13g02103 517 Coils Coil 177 239 - -
Bva13g02103 517 MobiDBLite consensus disorder prediction 391 424 - -
Bva13g02103 517 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02103 Bva-Chr13 16633455 16637156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02103 63 516 bZIP Transcription Factor Family AT1G19490 37.069 2.45e-63 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva13g02103 bZIP_1 4.4e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02103 - - gmx:100788624 463.381