Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02100 ATGGGTTCATTGTCTGGCACTTGGGAAATAGTTGAAGCAACGGAAGAGCTAAATTCAGGGAACAAGACGGGGAAAAATCAGAAGCTTCCCGAGCTGAAACTGGGATACAAGGATAATATTGATGATGACATTAATAAGCTGTTTGAATCAATTAGTCAAAAAACTTCGAGGGATTTATCTCTTCTACAAGATGGCACAAGCCCTAAGATGAAAAATGCCTTAAAAAAGCCAATTACAGTGGGTGTTGCTCGGTCCCCACGAATTGGGACTTCTGAGCCGGTGACTTTGAAGCAGGCATTGAGAGACCTATGCATATCCAAGGCATCAGAAATGGCTGCTATTAAACGGTTATCAAAGTCAACAAGTTCTCCAAGAGTATCTGAGGTTGGGAAGATAAAGACATTGTACAATGCTGTTGTAGCTGAACCTAGTCGAGCAGGGCTTTCTTTTGTTGAGAGTAAGGGGACTGTATATGAGGTATCTCTGGTGTCAGAAGAAAGCAAATCAGTTTCCTTGATGGAAACATCCCACTATTGTCAAACTGAGGTTGGGAAGATAAACACATTGCAGAATTCAGCTGTAGCTGAAGCCTGTCAACCAGGGCCTTCTTGTGTTGAGAGTAAGGGAGATATAGTTGAAACTTCTCCAGTtccagaagaaataaaagcaatttcCTCGGAGAAAACATCCCAGACTTGTCAAAATGCCAAAATCATATCAACTAGCGAGAAGGTTCATCAGTCTCCCAAATTGGCGATTCCAACTACACAGAATGATGCTGAGGCTTCAATGGTGCAAAGTAACTTGGTCTATTCTTCAACTAAGTTTGATGTTCAATTACAGAGAATGGAGACTTCTCAGACAGAAAAACAAGATTCTGCACATTCTCTGCCTGTTTCTGGTACTAATGCAAGCAAATTAGAGCTGCCAGAAAATacttcttcaaaaaaattaggaaataaaGCATTGGTGTCAAAGAATGGGCGGAAAGGCAGGTCACAAACGGTATCTTCATCATCTAATTCAGTAAATGTTAATAGATCGAGTAAGCTGTCCCGCAGTACTCCCCGTACAGTTAAATCAGTTATCAGGAACAAGAACTTGAGTAAGAAAAAACTAAAGCAGGATTCAAGTTCTGTTTTAAGTGCTCTTACTTCTaatgaaatgaataataaGTCAGTTCCCGGTCAAACTCAACTGATTTGTCAGAGATGCAGATGTACTTTAGAAAATACAAGTAATGGGGGCAGTCAAGAATCTATAGCATCAGAATCTACCAGCCCTGGAGATGGTGTAGACTCCAGTAACGTGCACGCGGGTGGAAATAATCCTGTTTTGACATCAACTAACTGTAACAGAAGCAGAGCAGTtgcaaaagtgaaaaagactACCAGATTGAGAGAGCAACTTGAATTTTCACAAAGCTCAAAAAGTAGCCAAGGTGAGTACAGTAGTAGTACCAGTACCAGTGATGATAGCAATGTGAGTGGGTCGACTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATAcgtcatgcatgcatgcagcaTGGAGTCTTGGGCTTGAGACACTTCAACCTTTTAAAGAAACTTGGTTGCGGAGACATTGGGACTGTATATCTTGCGGAACTAATTGGCACTAATTGCTTATTTGCTATTAAGGTTATGGACAATGAGTTTTTGGCAAGACGAAAGAAGATGCCTAGGGCTCAAactgaaagagaaatattaagGATGCTGGATCATCCTTTTCTCCCAACGCTGTATGCGCAATTCACATCAGATAATCTGTCGTGTCTGGTTATGGAGTATTGTCCTGGTGGAGATCTTCATGTCCTGCGGCAGAAGCAGCTTGGCAGAAGTTTTTCTGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTCGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCTGAAAATATTCTTGTTCGAGAAGACGGCCATATTATGCTAACGGATTTTGACCTGTCATTTAGGTGTGCTGTTAGCCCAACACTGCTGAAATCGTCATCTGATGTGGACCCTGCAAAGATTTCTGGTCCTTATACACGGTCTAGTTGCATTGAACCATTCTGTATCGAACCATCGTGTCAAGTTCCATGCTTCAGCCCTAGATTCTTACCCGCTTCtgcaaaagcaagaaaattaaaaactgaTCTTGCTGCTCATGTCAGATCATTACCACAGCTCGTGGCTGAGCCTACTGATGCAAGGTCAAATTCTTTTGTCGGTACACATGAATACTTGGCTCCTGAGATCATCAAGGGAGAGGGGCATGGAGCTGCAGTCGATTGGTGGACATTTGGTGTTTTTCTTTACGAGCTATTATATGGTAGAACACCTTTTAAAGGCTGTAATAATGAAGAAACATTAGCCAATGTGGTGTTGCAAGGCCTCAGATTCCCAGACAGCCCATTTGTTAGTTTCCAAGCAAGGGATCTGATAAGAGGGTTGTTGGTTAAAGAGCCTGAAAATCGTTTGGGTTCAGAGAAAGGAGCAGCTGAGATTAAACAACACCCCTTCTTTGAGGGGCTAAATTGGGCATTGATACGTTGTGCCATCCCACCGGAGCTGCCGGACTTTTGTGATTTTGGAATTTCAGAGTTGACCCAACAGGGAAAGGGTAAGTATTTGGAGTGTAATGCAACAGGAGACCATGTGGAATTTGAGTTGTTTTG 2738 0.4061 MGSLSGTWEIVEATEELNSGNKTGKNQKLPELKLGYKDNIDDDINKLFESISQKTSRDLSLLQDGTSPKMKNALKKPITVGVARSPRIGTSEPVTLKQALRDLCISKASEMAAIKRLSKSTSSPRVSEVGKIKTLYNAVVAEPSRAGLSFVESKGTVYEVSLVSEESKSVSLMETSHYCQTEVGKINTLQNSAVAEACQPGPSCVESKGDIVETSPVPEEIKAISSEKTSQTCQNAKIISTSEKVHQSPKLAIPTTQNDAEASMVQSNLVYSSTKFDVQLQRMETSQTEKQDSAHSLPVSGTNASKLELPENTSSKKLGNKALVSKNGRKGRSQTVSSSSNSVNVNRSSKLSRSTPRTVKSVIRNKNLSKKKLKQDSSSVLSALTSNEMNNKSVPGQTQLICQRCRCTLENTSNGGSQESIASESTSPGDGVDSSNVHAGGNNPVLTSTNCNRSRAVAKVKKTTRLREQLEFSQSSKSSQGEYSSSTSTSDDSNVSGSTCGNRPHMSKDVRWEAIRHACMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSFRCAVSPTLLKSSSDVDPAKISGPYTRSSCIEPFCIEPSCQVPCFSPRFLPASAKARKLKTDLAAHVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLANVVLQGLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDFCDFGISELTQQGKGKYLECNATGDHVEFELF 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02100 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Bva13g02100 912 MobiDBLite consensus disorder prediction 412 457 - -
Bva13g02100 912 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 181 912 - -
Bva13g02100 912 PANTHER FLIPPASE KINASE 1-RELATED 1 180 - -
Bva13g02100 912 MobiDBLite consensus disorder prediction 412 503 - -
Bva13g02100 912 Gene3D Transferase(Phosphotransferase) domain 1 610 678 - -
Bva13g02100 912 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 180 - -
Bva13g02100 912 CDD STKc_phototropin_like 528 880 - -
Bva13g02100 912 Gene3D Transferase(Phosphotransferase) domain 1 755 871 - -
Bva13g02100 912 MobiDBLite consensus disorder prediction 282 380 - -
Bva13g02100 912 SUPERFAMILY Protein kinase-like (PK-like) 507 877 IPR011009 -
Bva13g02100 912 PANTHER FLIPPASE KINASE 1-RELATED 181 912 - -
Bva13g02100 912 Pfam Protein kinase domain 759 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02100 912 Pfam Protein kinase domain 531 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02100 912 MobiDBLite consensus disorder prediction 469 503 - -
Bva13g02100 912 SMART serkin_6 530 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02100 912 Gene3D Phosphorylase Kinase; domain 1 528 609 - -
Bva13g02100 912 MobiDBLite consensus disorder prediction 282 363 - -
Bva13g02100 912 ProSiteProfiles Protein kinase domain profile. 530 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02100 Bva-Chr13 16608444 16613518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02100 1 912 AGC Kinase Gene Family AT3G52890 51.365 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva13g02100 Pkinase 3.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02100 - K08286 gmx:100813470 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02667 04 23467909 23468520 Bva13g02100 13 16608444 16613518 BWGD
Bva04g02450 04 22370076 22373685 Bva13g02100 13 16608444 16613518 BWGD