Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02097 atgGACTTCCATCTGAAGCAATGGAGAAACCAGCATGAGTCAGAGCAACAATATTCTGCAAAGATGCCAAAACTTCTCCTTGAACCCCATCAACAGCCACAATCATCTGCCTCTGCTCTTCCGTTGTTTGTACCTGAACCCAACAGCAAAGTCAGCACCTTGTCAGCATTTTCTGATTCAACAATGGCCACAACCAGATTTTCCAGGATGGGCAATTATTTCAGCGTGGCTCAGTGGCAGGAGCTTGAGCTGCAGGCTTTGATATTCAGGTACATGTTAGCCGGTGCTCCTGTTCCTTCTGAGCTCCTTCAGCCAATCAAGAAAAGCCTTGTCCATTCTCCTGCATTTTTCCTCAATCACCCTCTACAACATTATCCACATTATCAACCTGCTTTGTTGCAATCAGGGTATTGGGGAAGAGCTGCTATGGATCCAGAGCCCGGCCGATGCCGGAGGACTGACGGCAAAAAATGGCGGTGCTCGAGGGACGTGGTAGCCGGACAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAACCACCCCTGTCAGTGCTGCTACTGGTAGTGGGGCTATTGGTGCTACGGCCTCAATTTCTGCACCCCCTTTGGCAACAGCATCATTAAAATCCCCTTTTGATCTTCTTCCCCTTAATCAAAGTTCTTCTGGGACCAAGAACGAGAACAAGAGGTTGTTTGAAAGCCAAGAAAATGCGAGTGGGGAAGGAAGATCTGATGGCCATATTTTACGGCATTTCTTTGACGACTGGCCAAGATCACTTCAAGATTCTGATAATTGTGAAAGCAATGGTAGTAGCTCCATTAACTCGGCTACGTGCCTCTCTATTTCAATGCCTGGAAATACATCTTCGGACGTGTCTTTGAAATTGTCGACTGGCAATGGAGATACTCCTTGTCCTAGAACTGGAAGTGTTGACACTGAGCAACCCCAATTGAACTGGGGAGCCGCATGGAGTTCTGCTAATCAAGTGGCTTCCATGGGAGGACCACTAGCAGAAGCGCTGAGATCTTCTACCTCAACCTCTTCACCGACCAGTGTTCTACATCAATTGCCCCGGAGATCAGTGGCTGCCATGGAGAATACTTGGGGGAAAATGCTTGTATCGATCGTGTG 1169 0.485 MDFHLKQWRNQHESEQQYSAKMPKLLLEPHQQPQSSASALPLFVPEPNSKVSTLSAFSDSTMATTRFSRMGNYFSVAQWQELELQALIFRYMLAGAPVPSELLQPIKKSLVHSPAFFLNHPLQHYPHYQPALLQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTTPVSAATGSGAIGATASISAPPLATASLKSPFDLLPLNQSSSGTKNENKRLFESQENASGEGRSDGHILRHFFDDWPRSLQDSDNCESNGSSSINSATCLSISMPGNTSSDVSLKLSTGNGDTPCPRTGSVDTEQPQLNWGAAWSSANQVASMGGPLAEALRSSTSTSSPTSVLHQLPRRSVAAMENTWGKMLVSIV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02097 389 ProSiteProfiles WRC domain profile. 144 188 IPR014977 -
Bva13g02097 389 PANTHER - 11 375 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva13g02097 389 MobiDBLite consensus disorder prediction 186 201 - -
Bva13g02097 389 Pfam WRC 145 187 IPR014977 -
Bva13g02097 389 ProSiteProfiles QLQ domain profile. 73 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva13g02097 389 PANTHER GROWTH-REGULATING FACTOR 3 11 375 - -
Bva13g02097 389 MobiDBLite consensus disorder prediction 172 201 - -
Bva13g02097 389 Pfam QLQ 74 106 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva13g02097 389 SMART QLQ_2 72 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02097 Bva-Chr13 16592986 16596044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02097 1 369 GRF Transcription Factor Family AT3G52910 53.590 5.36e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva13g02097 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02097 - - qsu:112012246 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02457 04 22425809 22428291 Bva13g02097 13 16592986 16596044 BWGD
Bva13g02097 13 16592986 16596044 Bva13g02097 13 16592986 16596044 ECH