Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02094 ATGAATATGACGCAGAAGAAGGGACCAAATGGAATGGAGAAGCGAAGAGCTGGTAGAAAGAAATTCCATGAGACTCGGCACCCTATCTATAAGGGCGTAAGGAAAAGGAATGGAAAGTGGGTTTGTGAGCTGCGGCTCCCAAACAAGAAAAGTCGTCTCTGGCTTGGCACTTTTGCTCACCCGGACATGGCAGCAATAGCTTATGATGTTGCTGCTTTGGCTTTTAGGGGTGATTCTGCTTCACTGAACTTCCCAAATGCAGCAACCTCCTTGCCGCGACTTGATTCAAGCACCTCTTCCGTCAGAGCCATTCAGTTTGCTGCCATGGAAGCAGCTGAGAAGCACTTATCTGATCGTGTTGCTGCTTCATCATCAGATTTGGAGTATGATAGCGTTGGCTGCATGGAGATGGAGATGGAGAGCAGAGTCTCAGAAGTTGTTTCGGAAGCCGGAGATTCAAGCATTAATGGTTTGTTTTGGGATGAAGAGGAGGTGTTTAACATGCCAGCACTCATCGACAGCATGGCAGAAGGCTTGATCACTACACCACCTGCGTTGCAGAGAGGTTTCAATTGGGTTGAAATGGAAACTGCTGTAGACTTGACTCTCTGGGGATG 617 0.4797 MNMTQKKGPNGMEKRRAGRKKFHETRHPIYKGVRKRNGKWVCELRLPNKKSRLWLGTFAHPDMAAIAYDVAALAFRGDSASLNFPNAATSLPRLDSSTSSVRAIQFAAMEAAEKHLSDRVAASSSDLEYDSVGCMEMEMESRVSEVVSEAGDSSINGLFWDEEEVFNMPALIDSMAEGLITTPPALQRGFNWVEMETAVDLTLWG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02094 205 ProSiteProfiles AP2/ERF domain profile. 29 85 IPR001471 GO:0003700|GO:0006355
Bva13g02094 205 SUPERFAMILY DNA-binding domain 29 86 IPR016177 GO:0003677
Bva13g02094 205 MobiDBLite consensus disorder prediction 1 26 - -
Bva13g02094 205 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Bva13g02094 205 SMART rav1_2 29 91 IPR001471 GO:0003700|GO:0006355
Bva13g02094 205 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Bva13g02094 205 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Bva13g02094 205 PRINTS Ethylene responsive element binding protein signature 67 87 IPR001471 GO:0003700|GO:0006355
Bva13g02094 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 204 - -
Bva13g02094 205 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Bva13g02094 205 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 18 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02094 Bva-Chr13 16568989 16569778 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02094 14 204 AP2-EREBP Transcription Factor Family AT4G25470 45.833 1.57e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g02094 AP2 3.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02094 - - gmx:100778541 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02094 13 16568989 16569778 Bva04g02462 04 22457584 22458997 BWGD
Bva13g02094 13 16568989 16569778 Bva13g02094 13 16568989 16569778 ECH