Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02091 ATGGAAATGGAGGATCATcaccatcttcatcttcatcatcatcatcatcataatcTTAATCATAATCACAATCATCATCCCCACCAACAACAAGACCAGCAGTGTAATATACCCGATCTCAGACAACTCATGAACGGACCAAGGTCGTCGTCTTCCGCCCATTTCCCTTGTATACCTGCTGCTCAAACGCAGCCTACGGCAGAGTTCTTCCCTGGTCACCGGAATCTCACAGCGACGCCGACACCAACCCACCACCAACACTACGAGATGATGATGTTTGGTCGTCCAGTAGCTGACATAATGCCTCGTGGTCTTCACGACTTTGCTGCTGCCTCTGATTCTGCTACTGCAGTTGCCGCTGCTGCTCCTACTAATACCAGCATTACAGTAGCCACTCCCACCACAACAAGCACCTCAACTCCTTCCCTTAGTGGCTTAGAGGCTGAGACCACAGCCTGGCTCGGTGGAGATGCCTCCACCGGAAGATGGCCCAGGCAAGAGACTCTTACTCTTCTTGAGATCAGATCTCGTCTTGACCCTAAATTCAAAGAGGCTAATCAAAAGGGACCCTTATGGGACGAAGTTTCAagGATCATGTCAGAAGAACATGGATATCAAAGGAGTGGCAAAAAATGCAGGGAAAAGTTTGAAAACTTGTACAAATATTACAAGAAGACCAAGGAAGGTAAAGCAGGAAGACAAGATGGGAAGCACTACAGATTCTTCCGTCAACTTGAAGCCTTATATGGAGAAAACAGTAACACAACCTCAATGCCAGAAGCCAATTTTGGTGGTGGCAGTCTTCGTTTTCAGACGAGCAGCCATGGCCCTTCCCAAACAAATCAAGAAATGCTTCAATCTCACAAGCACTGTGATAGCCTCAGCCTCACTAATTCCACTGAATTTGGCACGTCATCTTCTGATGACAATGATATGAGCCCTGTGGGGTTGATGGACAATGATTCCAcggagaaaaggagaaaaagaaagagtggAAGGAGCTGGAAGGTAAAGATAAAGGACTTCATTGATTCACAGATGAGGAAGCTGATGGAGAAGCAAGAGACGTGGTTGGATAGACTCATGAAAACAATGGaacagaaggaaaaggaaagggcATTAAGAGAGGAAGAATGGAGGAGACAAGAAGCAGTCAGGTTAGAAAGGGAGCACAAGTTCTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGGGATGCTGCTTTAATTGATGCCTTGCAAAACTTAACCGGAAGGCAGATAAAGGCTCAATCTCCGGAAGGTCTAATGGCTGctgaaattcaaaatcatagCGAAAACCAGAATGAAGATGGTAGCGAAATACTAAATAGCAATACTAGAGGTGCTGAAAGCTGGCCAGAATCTGAGATTTCAAGGCTTATGCAGTTGAAAGCTGAGATAGAGTCGAGGTTTCAGCAAAGTGGATGTTCAGAAGAGGTTCTATGGGATGAAGTTGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGACAGCTACAATGTACAAAGATAAATGGGAAAGTATCACTAACTATCCAAAGAATTCAAAGGAAGCAAACAAGAAGCGCAAGGAAAATTCAAGGAGCTGTTTTTACTTTGAGAACAATGATCAATCCTCCTTATACAATCATGGAAGTGCTTATTGTGAAATGAACCAACAACACCAGGATGGTGGGAGACTGCAGGCAAATGATGGTTCTTCACCTTCAAATTCCAATGTTGCAAATGCAGTTCCAGCTGAAAGCTGTTTTCCCTTCTTGATAAGCGAGGGAGAAAATTTGTGGGAGAACTATGGATTAAAGCTCCATAAAGGAAATCAAAACCAGTA 1844 0.4214 MEMEDHHHLHLHHHHHHNLNHNHNHHPHQQQDQQCNIPDLRQLMNGPRSSSSAHFPCIPAAQTQPTAEFFPGHRNLTATPTPTHHQHYEMMMFGRPVADIMPRGLHDFAAASDSATAVAAAAPTNTSITVATPTTTSTSTPSLSGLEAETTAWLGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNTTSMPEANFGGGSLRFQTSSHGPSQTNQEMLQSHKHCDSLSLTNSTEFGTSSSDDNDMSPVGLMDNDSTEKRRKRKSGRSWKVKIKDFIDSQMRKLMEKQETWLDRLMKTMEQKEKERALREEEWRRQEAVRLEREHKFWAKERAWIEARDAALIDALQNLTGRQIKAQSPEGLMAAEIQNHSENQNEDGSEILNSNTRGAESWPESEISRLMQLKAEIESRFQQSGCSEEVLWDEVATKMACFGYERTATMYKDKWESITNYPKNSKEANKKRKENSRSCFYFENNDQSSLYNHGSAYCEMNQQHQDGGRLQANDGSSPSNSNVANAVPAESCFPFLISEGENLWENYGLKLHKGNQNQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02091 614 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 56 610 - -
Bva13g02091 614 MobiDBLite consensus disorder prediction 9 24 - -
Bva13g02091 614 Pfam Myb/SANT-like DNA-binding domain 162 248 IPR044822 -
Bva13g02091 614 Pfam Myb/SANT-like DNA-binding domain 457 542 IPR044822 -
Bva13g02091 614 MobiDBLite consensus disorder prediction 1 33 - -
Bva13g02091 614 Gene3D - 163 225 - -
Bva13g02091 614 Gene3D - 458 520 - -
Bva13g02091 614 MobiDBLite consensus disorder prediction 559 579 - -
Bva13g02091 614 ProSiteProfiles Myb-like domain profile. 155 220 IPR001005 -
Bva13g02091 614 CDD GT1 458 522 - -
Bva13g02091 614 CDD GT1 162 227 - -
Bva13g02091 614 MobiDBLite consensus disorder prediction 437 456 - -
Bva13g02091 614 Coils Coil 351 378 - -
Bva13g02091 614 MobiDBLite consensus disorder prediction 252 332 - -
Bva13g02091 614 PANTHER - 56 610 - -
Bva13g02091 614 MobiDBLite consensus disorder prediction 252 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02091 Bva-Chr13 16547108 16550606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02091 29 609 Trihelix Transcription Factor Family AT5G03680 44.822 6.23e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva13g02091 Myb_DNA-bind_4 7.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02091 - - gmx:100813245 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02463 04 22468547 22472212 Bva13g02091 13 16547108 16550606 BWGD
Bva13g02091 13 16547108 16550606 Bva13g02091 13 16547108 16550606 ECH