Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02083 ATGGAAATGCCCGGTAGAAGATCGAACTACACGCTTTTGAGTAAAATTCCTGATGACCCGTTTGCTGGCGGAGTCACCTTATCGGGAACAACAGCTCCTACTTCTTCGTCTGGGGACGGGAAGAACCATAAAGGCAAGGTCGATAGAGGCTTTGATTGGGACTTAGCTACTGATCACAGGGTCACTCAGCAGGGGAATCGGATCGGAAACTTATATTCATCGATTGGCTTGCAGAGGCAGTCTAGTGGGAGCAGTTTTGGTGAAAGCTCGCTGTCAGGGGAGTATTATGCTCCAACCCTGTCAGCAACAGCTACGAATGAGATCGATGCCTTTGCGTACATGCATGAAGATGGATTCAAGATTAGTGGAGGCGGTGTTGGTGGTGAGCTGAGAACCAAGTTGACGGAGACCACGTTGAGAACAGGAGGCTCGTCATCAGGTAAAAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAATTACAGCTAGCTTTGGCACTTCGGTTTTCATCTGAGGCAACTTGTGCTGACGATCCCAATTTTCTGGATCCAGTACCAGATGAATCCGCTCTAAGATCGTCATCACCAAGTTCGGTGGAGGCAGTGTCACATCGATACTGGGTGCATGGCTGCCTATCATACTATGACAAAATTCCCGATGGCTTTTACCTAGTTCAAGGGATGGAACCCTATGTTTGGAATGTGTGCACTGATCTGCAGGAAAATGGTCGGATTCCATCAATTGAGTCTCTAAAATCTGTGGATCCTTGCACTGATTCTTTACTTGAAGTAATTTTGGTGGATCAATGGAGTGATCCTAGCTTAAAGGAACTGCAAAATAGAGCACTTGACATCTCTAGTAGCTGCGTAACCACAACAGAAGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACCGTATGGGGGGTGCAGCTTCTGTTGGGGAAGATGACTTTGTTTCCATCTTGAGGGAGTGCAGTAATGATCTTAAAGATTGCTTAGGATCTGTTGTTCTTCCAATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCTATATTATTCAAAGTACTGGCTGACACTGTTGATTTACCGTGTCGAATTGCAAAGGGCTGTAAATATTGCTCAAGAGATGATGCTTCCTCTTGTCTTGTTCGGTTTGGACTTGACAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTCATTTATGTGTGCCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCAGCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAATATTTCTCAGATTGTCTGTCCATTGAGCTCGTCTTTGACAGTAATTCTTCAGATTCGACTGCTATGGGCAAGGATATAGCACCTTTAAAGCTTAACCGACCTGTTGTGCATAAAGACATTCACTCCTCTTCAGTGCTGACCAATTCAAATGTGGACATAATTGAGGGTAGGAGGTTTACTGAAGGAAGCCAACTGGTTCCTAGCAAACCTAATAGAGACCTTGGCCTTGATATGGAGGATTTGGACATACCATGGAGTGATCTTGTTTTAAAAGAGAGAATAGGATCAGGTTCTTTTGGAACAGTGCATCGTGCTGAGTGGAATGGCTCAGATGTTGCTGTGAAAATTCTAATGGAACAAGATTTTCTCGCTGAACGATTCAAAGAATTTCTGAGGGAGGTGGCAATAATGAAACGCTTGCGGCATCCaaacattgttttatttatgggTGCTGTCACGCAGCCTCCAAATTTATCTATTGTCACAGAATATTTATCAAGGGGTAGCTTATACAGGCTTTTGCATAAACCTGGTGCCAGAGAGATATTAGATGAGAAACGTAGGTTGAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAGCGTAACCCTCCGATTGTTCATAGAGATCTGAAGTCACCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGCCTTTCCCGTCTGAAGGCAAATACATTTCTCTCGTCCAAGTCAGCTGCTGGAACTCCTGAATGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAATCAGATGTTTATAGCTTTGGTATAATCTTGTGGGAGCTGGCAACATCGCAACAGCCGTGGGGTAATTTGAATCCAGCACAGGTTGTAGCAGCTGTTGGCTTTAAGGGCAAACGGCTTGAGATTCCCCGTGACTTGAACCCCCAAGTAGCTGCAATAATCGAGGCTTGCTGGGCTAACGAGCCCTGGAAACGTCCTTCTTTTGCTAGTATCATGGATTCTTTGAGGCCGTTGATCAAACCCCCAATGCCTCAACCCGCTCTAGCCCGAGAGTCACAGTTGTATATTTCTGCACTAATTCAGATTGAGAATACTGATTTTCAAGCAAAGCAAGGATACTTATTCTTTTTCccaacaaaaattattgtttg 2501 0.4418 MEMPGRRSNYTLLSKIPDDPFAGGVTLSGTTAPTSSSGDGKNHKGKVDRGFDWDLATDHRVTQQGNRIGNLYSSIGLQRQSSGSSFGESSLSGEYYAPTLSATATNEIDAFAYMHEDGFKISGGGVGGELRTKLTETTLRTGGSSSGKSWAQQTEESYQLQLALALRFSSEATCADDPNFLDPVPDESALRSSSPSSVEAVSHRYWVHGCLSYYDKIPDGFYLVQGMEPYVWNVCTDLQENGRIPSIESLKSVDPCTDSLLEVILVDQWSDPSLKELQNRALDISSSCVTTTEVVDQLAKLVCNRMGGAASVGEDDFVSILRECSNDLKDCLGSVVLPIGSLSVGLCRHRAILFKVLADTVDLPCRIAKGCKYCSRDDASSCLVRFGLDREYLVDLIGKPGHLCVPDSLLNGPSSISFSSPLRFPRLKPAAEPTIDFRSLAKQYFSDCLSIELVFDSNSSDSTAMGKDIAPLKLNRPVVHKDIHSSSVLTNSNVDIIEGRRFTEGSQLVPSKPNRDLGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFLAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREILDEKRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATSQQPWGNLNPAQVVAAVGFKGKRLEIPRDLNPQVAAIIEACWANEPWKRPSFASIMDSLRPLIKPPMPQPALARESQLYISALIQIENTDFQAKQGYLFFFPTKIIV 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02083 833 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 796 - -
Bva13g02083 833 ProSiteProfiles Protein kinase domain profile. 531 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02083 833 PANTHER BNAA03G01030D PROTEIN 35 796 IPR028324 GO:0004672
Bva13g02083 833 MobiDBLite consensus disorder prediction 24 45 - -
Bva13g02083 833 ProSitePatterns Protein kinases ATP-binding region signature. 537 558 IPR017441 GO:0005524
Bva13g02083 833 Gene3D Transferase(Phosphotransferase) domain 1 610 795 - -
Bva13g02083 833 PRINTS Tyrosine kinase catalytic domain signature 605 618 IPR001245 GO:0004672|GO:0006468
Bva13g02083 833 PRINTS Tyrosine kinase catalytic domain signature 646 664 IPR001245 GO:0004672|GO:0006468
Bva13g02083 833 PRINTS Tyrosine kinase catalytic domain signature 693 703 IPR001245 GO:0004672|GO:0006468
Bva13g02083 833 PRINTS Tyrosine kinase catalytic domain signature 712 734 IPR001245 GO:0004672|GO:0006468
Bva13g02083 833 PRINTS Tyrosine kinase catalytic domain signature 756 778 IPR001245 GO:0004672|GO:0006468
Bva13g02083 833 Pfam Protein tyrosine and serine/threonine kinase 532 785 IPR001245 GO:0004672|GO:0006468
Bva13g02083 833 SUPERFAMILY Protein kinase-like (PK-like) 521 807 IPR011009 -
Bva13g02083 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Bva13g02083 833 Gene3D Phosphorylase Kinase; domain 1 524 609 - -
Bva13g02083 833 SMART serkin_6 531 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02083 833 CDD STKc_MAP3K-like 537 785 - -
Bva13g02083 833 Pfam Ethylene-responsive protein kinase Le-CTR1 198 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02083 Bva-Chr13 16506671 16514249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02083 1 796 MAP Kinase Kinase Kinase AT5G03730 70.254 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva13g02083 PK_Tyr_Ser-Thr 4.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02083 K14510 - zju:107432147 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02470 04 22517517 22518137 Bva13g02083 13 16506671 16514249 BWGD
Bva13g02083 13 16506671 16514249 Bva13g02083 13 16506671 16514249 ECH