Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02073 ATGGACGAAAAGGACAGCACTATTTCTGCGTCACCCGGAAACACAGAGTCCGGGTCACCTGTGAGTGCCTCCGTACCAGAGGTGATGAACATGGCGAATGTGGAGAATAGTGGAGGGGCAACAGTTGCAGCAGTAGCCCCGGCAACGATATCAACACCGGCAAGCACCGGAGGAGGAGGCAGCTTAGACTTatttgggaaaaagaaaagagggaggCCGAGAAAATATGACGCAGATGGGAACTTGAGGTCGGTATACCAGAGTGCACCACAAGCATCACCAGGGTTTTCTTTGTCGCCGGGTTCACCATCAGAGTTTTCTTCTAAAAGGGGTCGAGGGAGGCCTACTGGTTCTGGCAACTGGCAGCTACTTGCATCTTTAGGCGATTTGCTTGCAAACACAGCTGGTGGGGATTTTACGCCCCATGTGGTAACTGTTCATACTGGAGAGGATGTTGCTGGAAAAATTCTTCAATTCGCACAGAAAGGTCCTAGGGGAATATGCATTCTTTCCGCTAATGGAGCTATTTCCAATGTTACTATACGGCAACCTGGTTCTTCTGGTGGCTTATTGACTTACGAGggTCGTTTTGAGATTCTATCTCTGTCTGGGTCATTCACAGTTGTTGACAATGGTGGCATAAAAGGTAGGACTGGTGGGTTGAGCGTTTCACTTGCTGGCCCCGATGGTCGCGTGATAGGAGGTGGTGTTGCTGGCTTATTAACTGCTGCTAGTCCAATCCAAATTGTTATGGGAAGCTTCATGCCAGTTGGTTACAAACCTCCTCATAAAAGGAAGCAACAGCATCGTGAACATGCAGTGGTGTCCCCTATTTCAAGTGCTCCAGATACAGTAACAGCAGCAAAACCTGTTTCACAAGCAAACCCAGCTGGTGAAAAGTGTTTGACACCAACGTCTCAGTTACCAGAACAAAACCAGATTGTATCCGATATCTTTACGAGCAGTGAAAAACTGAACTTAGATGCCACAACAAATGCTGCTGCTCACTGGAATGGTACCGGAGAATTGTCAGATCAGAGGATATCCCCAGACATTAATATAACTTTACCTGGCGACGAGAATTTTTA 1088 0.4642 MDEKDSTISASPGNTESGSPVSASVPEVMNMANVENSGGATVAAVAPATISTPASTGGGGSLDLFGKKKRGRPRKYDADGNLRSVYQSAPQASPGFSLSPGSPSEFSSKRGRGRPTGSGNWQLLASLGDLLANTAGGDFTPHVVTVHTGEDVAGKILQFAQKGPRGICILSANGAISNVTIRQPGSSGGLLTYEGRFEILSLSGSFTVVDNGGIKGRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMPVGYKPPHKRKQQHREHAVVSPISSAPDTVTAAKPVSQANPAGEKCLTPTSQLPEQNQIVSDIFTSSEKLNLDATTNAAAHWNGTGELSDQRISPDINITLPGDENF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02073 362 MobiDBLite consensus disorder prediction 50 119 - -
Bva13g02073 362 MobiDBLite consensus disorder prediction 7 32 - -
Bva13g02073 362 MobiDBLite consensus disorder prediction 65 79 - -
Bva13g02073 362 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 264 - -
Bva13g02073 362 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 254 IPR005175 -
Bva13g02073 362 ProSiteProfiles PPC domain profile profile. 136 281 IPR005175 -
Bva13g02073 362 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 357 IPR039605 GO:0003680
Bva13g02073 362 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 7 357 - -
Bva13g02073 362 MobiDBLite consensus disorder prediction 1 32 - -
Bva13g02073 362 Gene3D - 141 274 - -
Bva13g02073 362 SMART AT_hook_2 109 121 IPR017956 GO:0003677
Bva13g02073 362 SMART AT_hook_2 67 79 IPR017956 GO:0003677
Bva13g02073 362 MobiDBLite consensus disorder prediction 84 119 - -
Bva13g02073 362 CDD DUF296 140 254 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02073 Bva-Chr13 16442325 16445655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02073 67 330 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 47.122 1.20e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02073 - - vvi:100254577 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02073 13 16442325 16445655 Bva13g02073 13 16442325 16445655 ECH