Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02069 ATGATGAATAAGCCTTATTCTACAAACGTTGTCTTAgcctttgctttcttcttcctcacatTCACACTGTCTCTCTGTCTTCACCATCACCAGAATGATACTTACGCTCTCGCCCAATTTCAGCTCCAAACAGACGCTCATGGCTACCTCGCCTCTAACTGGACAGGCCCTGATGCCTGCACCGCCGCCTGGCGCGGTGTTGAATGTTCCTCCAGTGGCAGAGTCACCGCCCTTTCTCTCCCTTCCCTCAATCTCCGAGGTCCCATTGACTATCTTTCATTGCTCACCCATCTTCGCTTCCTTGATCTCCACGATAACCGTCTAAACGGCACCATTGCGCCTCTTTCCAACTGCACCAATCTTAATCTTCTTTATCTTGCCCGCAATGACTTCTCCGGCGAGATACCTCCGGAGATATCGTCTCTCAAGCTTCTGCTTAGGCTTGACCTCTCCGACAACAACATTCGCGGTCCAATTCCCAAGGAGTTGTCCCAATTGAATCAGCTTCTGACGCTTCGGTTACAGAACAACGTCCTGTCTGGTCCAATGCCAGATCTTTCTGTCTCTCTGGGGAAACTCAAAGAGCTGAATATGACCAACAACGAGCTCTATGGACGCGTTCCCGATGCAATGTTGAAGAAATTCGGTGATATAAGCTTCTCGGGGAACGAAGGTCTATGTGGGTCGAATCCATTGCCGGCTTGTTCCTTCACTGAGAATCCACCTTCGTCAACATCAACTGAGACAGTTCCTTCTAACCAGAGCTCGTTGCCGCAAACAAGCATAATTGCTCAGCCAAAATCCCAATCGCGAAAAGGACTAAGTCCCGGAGCTATAGTAGCCATTGTGATAGCTAATTGTGTGGCATTGTTGGTGGTAACCTCTTTCATTGTTGCTCACTGTTGCGCCAGAGGACGAAGCTCCAGTTCCATGGTGGGCAGTGAAAGCGGAAAGAGGAAAAGCAGTAGTTATGGGAGTGAGAAGAAGGTATATGCCAATGGGGCTGGAGATAGTGATGGAACTGCTGAGACAGACCGAAGCAAGCTTGTGTTTTTCGATAGGAGGAGTCAATTTGAGCTCGAAGATTTGCTGCGAGCATCGGCAGAGATGCTGGGGAAAGGTAGCTTGGGGACAGTTTACAGGGCAGTGCTTGATGATGGATGCACAGTAGCTGTGAAGAGACTCAAGGACGCAAACCCATGCGCCAGAAAGGAGTTTGAGCAGTACATGGATGTCATTGGAAAACTGAAGCACCAAAACATCATCAGACTCAGGGCCTTTTACTATGCCAAGGAAGAAAAGCTTCTTGTTTATGATTATCTCCCCAATGGAAGCTTGCATTCTCTTCTCCATGGGAACCGAGGTCCAGGGAGAATTCCATTGGATTGGACCACAAGAATCAGCTTGGTGTTAGGGGCAGCCAGAGGACTTGCTCGGATTCATGCAGAATATAGTGCAGCAAAGATACCTCATGGGAACATCAAATCTTCCAACGTGCTTCTTGACAAAAATGGCCTTGCTTGCATCTCTGATTTCGGGTTGTCCCTGTTATTGAACCCTGTCCACGCCATTGCAAGAATGGGAGGGTACAGAGCTCCTGAACAAGCAGAAGTCAAGAAGCTCTCTCAACAAGcagatgtttatagttttgggGTTTTGTTGTTGGAAGTTCTGACCGGGAGAGCTCCCTCACAGTACCCTTCACCAACAGGGTACAAGAACATTGAAGAGGAGGAATCACAAGCTGTGGATCTTCCCAAATGGGTTCGTTCTGTTGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTCTTGCGGTACAAGAACATTGAAGAAGAGCTGGTTTCAATGCTGCATGTGGGGTTGGCTTGTGTGGTGCCTCAGCCAGAGAAGAGGCCAACCATGGCGGAAGTCACCAAGATGATAGAGGATATCAGGGTAGAGCAATCTCCTCTTGGAGAGGATTATGATGAGTCACGCAACTCGCTTTCACCTTCACTTGCCACCACTGAAGATGGGCTACCATG 2033 0.4761 MMNKPYSTNVVLAFAFFFLTFTLSLCLHHHQNDTYALAQFQLQTDAHGYLASNWTGPDACTAAWRGVECSSSGRVTALSLPSLNLRGPIDYLSLLTHLRFLDLHDNRLNGTIAPLSNCTNLNLLYLARNDFSGEIPPEISSLKLLLRLDLSDNNIRGPIPKELSQLNQLLTLRLQNNVLSGPMPDLSVSLGKLKELNMTNNELYGRVPDAMLKKFGDISFSGNEGLCGSNPLPACSFTENPPSSTSTETVPSNQSSLPQTSIIAQPKSQSRKGLSPGAIVAIVIANCVALLVVTSFIVAHCCARGRSSSSMVGSESGKRKSSSYGSEKKVYANGAGDSDGTAETDRSKLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARKEFEQYMDVIGKLKHQNIIRLRAFYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVLLDKNGLACISDFGLSLLLNPVHAIARMGGYRAPEQAEVKKLSQQADVYSFGVLLLEVLTGRAPSQYPSPTGYKNIEEEESQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVPQPEKRPTMAEVTKMIEDIRVEQSPLGEDYDESRNSLSPSLATTEDGLP 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02069 677 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Bva13g02069 677 MobiDBLite consensus disorder prediction 651 677 - -
Bva13g02069 677 ProSiteProfiles Protein kinase domain profile. 365 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02069 677 Gene3D Transferase(Phosphotransferase) domain 1 441 665 - -
Bva13g02069 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 668 - -
Bva13g02069 677 SUPERFAMILY L domain-like 31 214 - -
Bva13g02069 677 CDD STKc_IRAK 371 647 - -
Bva13g02069 677 Gene3D Ribonuclease Inhibitor 145 236 IPR032675 -
Bva13g02069 677 Gene3D Ribonuclease Inhibitor 32 144 IPR032675 -
Bva13g02069 677 Gene3D Phosphorylase Kinase; domain 1 337 440 - -
Bva13g02069 677 SUPERFAMILY Protein kinase-like (PK-like) 369 644 IPR011009 -
Bva13g02069 677 MobiDBLite consensus disorder prediction 237 272 - -
Bva13g02069 677 MobiDBLite consensus disorder prediction 307 342 - -
Bva13g02069 677 PANTHER LRR RECEPTOR-LIKE KINASE 7 668 - -
Bva13g02069 677 Pfam Protein kinase domain 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02069 Bva-Chr13 16417750 16420374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02069 31 673 Receptor kinase-like Gene Family AT2G36570 68.986 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva13g02069 Pkinase 3.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02069 - - pper:18771548 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02484 04 22584914 22587589 Bva13g02069 13 16417750 16420374 BWGD
Bva13g02069 13 16417750 16420374 Bva13g02069 13 16417750 16420374 ECH