Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02066 ATGGAACCCAATGGACTTGACGGTGGTATGTTTTCTAGCATCAATCCTGGGTTGGTAGCATTAGAAAATCCTTTACACCAACAGCCAAACGCCCCCAATCCACAGAATCCTCACCATTTGCATCAAACCCAAATGGTTTCTTATGCCCACCACGACAATGATCACCACCCACAAGCACAGCCTTCAATCAAACATGGGTACCCATATTCTGCTAAGAACAAGCAACCGACACCGCTCAGCGATGAAGACGAGCCTGGGTTCGCAGCCGATGACAGCACCGGGGAccccaaaaggaaaatatcacCATGGCAAAGAATGAAGTGGACGGATACCATGGTTAGGCTCTTAATAATGGCGGTTTACTGCATTGGAGATGAGGGTGGTCCAGAAGGAACGGATCCCACGGGGAAGAAGAAGACTACGTGCTTGTTGCAGAAGAAAGGGAAATGGAAATCGGTATCGAAGGCTATGATGGAGAAGGGGTTTTATGTCTCTCCTCAGCAATGCGAGGATAAATTCAATGATCTGAATAAGAGGTACAAGAGGGTGAATGATATTCTGGGTAAGGGAACAGCTTGCAAGGTTGtggaaaatcaaaacttgTTGGATACAATGGATTTATCACCAAAGATGAAAGAAGAAGCTCGAAAATTGCTGAATTCTAAGCACCTATTCTTCAGAGAAATGTGTGCTTACCATAATAGTTGTAATCATGGAAACACTAGTGGTGCCAATCAGTCCCCAGAGGTCGGAATCGATGCATCTCTGGCTCAACCATCAcaacagcaacagcaacaacaacagcaacaaTTGGCCCAGAATCAGCGATGCTCTCATTCATCAGATAATGTGGTGGGGAATTTGGGCAGGGCAGGCCCAGAAGGATTGAAGATGTTGAAAGGAGGAAGCGGGGAAGATGATGACGATGACgatgaagaagatgattcTGATGACTATTCTGAAGAAGACGAATATGATTCTGCAGAAGGTGGTTCAAGGGGTCAAATGGGGCATGGACACGAGGATTATGATGACAACGATGGACGGGCTTCGCGAAAAAGACCAAGGAAAACAGCGTTTCCTGTTTCTTCTCAGGGAATGCAGCAATTGAGCAGTGAGGTGACGAGTGTGTTCCAAGATGGGGGAAGGAGCACTTGGGAGAAAAAGCAATGGATGAAGTCGAGGCTAATGCAATTGGAGGAGCAGCAGATACAGTATCAGTATCAAGCATTTGAGTTGGAAAAGCAAAGGCTGAAATGGGTCAGGTTTAGCAGCAAGAAGGAGAGGGATATGGAAAGATCTAAGCTTGAAAATCAACGGGGACGCCTTGAAAATGAGAGGATGGTTTTGCTGATTCACCAGAAGGAGCTTGAATTGCAGAATCTTCAGCATCAGAAACACTCTTCTAACTA 1412 0.4341 MEPNGLDGGMFSSINPGLVALENPLHQQPNAPNPQNPHHLHQTQMVSYAHHDNDHHPQAQPSIKHGYPYSAKNKQPTPLSDEDEPGFAADDSTGDPKRKISPWQRMKWTDTMVRLLIMAVYCIGDEGGPEGTDPTGKKKTTCLLQKKGKWKSVSKAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACKVVENQNLLDTMDLSPKMKEEARKLLNSKHLFFREMCAYHNSCNHGNTSGANQSPEVGIDASLAQPSQQQQQQQQQQLAQNQRCSHSSDNVVGNLGRAGPEGLKMLKGGSGEDDDDDDEEDDSDDYSEEDEYDSAEGGSRGQMGHGHEDYDDNDGRASRKRPRKTAFPVSSQGMQQLSSEVTSVFQDGGRSTWEKKQWMKSRLMQLEEQQIQYQYQAFELEKQRLKWVRFSSKKERDMERSKLENQRGRLENERMVLLIHQKELELQNLQHQKHSSN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02066 470 Coils Coil 426 465 - -
Bva13g02066 470 MobiDBLite consensus disorder prediction 256 381 - -
Bva13g02066 470 MobiDBLite consensus disorder prediction 256 285 - -
Bva13g02066 470 Pfam Myb/SANT-like DNA-binding domain 105 231 IPR044822 -
Bva13g02066 470 MobiDBLite consensus disorder prediction 361 381 - -
Bva13g02066 470 MobiDBLite consensus disorder prediction 305 325 - -
Bva13g02066 470 MobiDBLite consensus disorder prediction 335 354 - -
Bva13g02066 470 Coils Coil 396 416 - -
Bva13g02066 470 MobiDBLite consensus disorder prediction 52 102 - -
Bva13g02066 470 PANTHER F16F4.11 PROTEIN-RELATED 1 469 - -
Bva13g02066 470 Gene3D - 108 182 - -
Bva13g02066 470 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02066 Bva-Chr13 16398702 16400672 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva13g02066 Myb_DNA-bind_4 8.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02066 - - zju:107432054 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02487 04 22602177 22603987 Bva13g02066 13 16398702 16400672 BWGD
Bva13g02066 13 16398702 16400672 Bva13g02066 13 16398702 16400672 ECH