Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02063 ATGGTTCTCAAGACAGAGCTTTGTCGTTTTAGTGGGGCTAAGATCTACCCAGGGAAAGGCATCAGATTTGTTCGTGGTGATTCTCAGGTCTTCCTATTTGCTAATTCAAAATGCAAAAGGTATTTCCACAATCGGTTGAAGCCATCCAAGCTCACTTGGACTGCCATGTATCGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGTCGTACTACTAAGAAACCTTACTCCAGATCTATTGTCGGTGCTACTTTGGAAGTCATTCAGAAGAGAAGAACTGAGAAGCCCGAGGTTCGGGATGCAGCTAGGGAAGCGGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAAACGAAGGATGAGAAGAAGGCCAAGAAGGCAGAAGTGCTTGCCAAGTCACAAAAAACACAGGGCAAAGGCAATGTTTCCAAGGGTGCTGGACCTAAAGGTCCTAAACTTGGTGGTGGAGGCGGGAAGCGCTG 494 0.4696 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVLAKSQKTQGKGNVSKGAGPKGPKLGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02063 164 Coils Coil 112 136 - -
Bva13g02063 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Bva13g02063 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Bva13g02063 164 MobiDBLite consensus disorder prediction 118 136 - -
Bva13g02063 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Bva13g02063 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Bva13g02063 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Bva13g02063 164 PANTHER 60S RIBOSOMAL PROTEIN L24 3 164 - -
Bva13g02063 164 SMART 4TRASH 8 46 IPR011017 -
Bva13g02063 164 MobiDBLite consensus disorder prediction 118 164 - -
Bva13g02063 164 PANTHER 60S RIBOSOMAL PROTEIN L24 3 164 IPR000988 -
Bva13g02063 164 Gene3D - 69 140 - -
Bva13g02063 164 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02063 Bva-Chr13 16380695 16383038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02063 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.439 6.69e-87 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02063 K02896 - gmx:100499884 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02491 04 22617300 22619223 Bva13g02063 13 16380695 16383038 BWGD
Bva13g02063 13 16380695 16383038 Bva13g02063 13 16380695 16383038 ECH