Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02062 ATGGGAGACAAGCACGAAAAGGATCAAACTGAGAGCAGCGATTACACGTCCGATGACGAAGGTACCGAGGATTATCGACGGGGAGGATACCACGCTGTGCGAATCGGTGACACCTTCAAGAATGGTCGCTATGTTGTTCAGAGTAAGCTCGGTTGGGGGCATTTTTCCACTGTTTGGCTCGCTTGGGATATCCTACACTCTAGATATGTTGCTATGAAAGTTCAAAAGAGCGCCCAGCATTACACTGAGGCAGCCATGGACGAGATAACCATTTTGCAGCAGATTGCAGAGGGAGATCCAGACGATAAAAAATGTGTGGTAAAGCTATTGGATCATTTTAAGCATTCGGGTCCAAATGGACAGCATGTTTGCATGGTATTTGAGTACCTGGGAGATAATCTTTTAACTCTTATTAAGTACAGTGATTATCGTGGAATGCCTATCCATATGGTTAAAGAgttatgttttcatattttggttGGATTGGATTACTTACATAGGCAGCTCTCTATCATACATACTGACTTGAAACCAGAGAACGTTCTCTTATTATCAGCGATAGATCCGTCTAAGGATCCTAGAAAGTCTGGTGCTCCTCTAATTCTTCCTAATAGTAAAGACAAGACTATACTAGAGTCAGGAGTTGTAAAAGACGTTAAAACATCAAATGGAGATTTGATTAGGAATCATAAGAAAAACATTAGAAGGAAAGCTAAGCAAGCAGCACAGGGATGTGCGGAGAAAGAAGCTTCTGAGGAAGGTGAGGGGGATCCAGAACCTTTTGGTGCTGTAGACTCATCTCTAAATGCAATGTCAAATACCGATTCTGTAAAAGAACAAGCTTCTAGTTCTGCTGGGGCTAATAGGTTGTCAGATGCTGATGGAACAAAGGGAgtgaagaaaagaggaaatcGATCAATGAGGCAGAAGCTACTAGCATCAGTTGACCTCAAGTGCAAATTAGTTGACTTTGGTAATGCTTGCTGGACGTATAAACAGTTTACAAATGATATCCAGACTAGACAATATCGATGTCCAGAGGTGATCCTTGGATCAAAGTATTCTACCTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTACTATTTGATCCTCACAGCAGTGAAAACTTTGACAGGGATGAGgACCACTTAGCATTAATGATGGAACTTCTGGGAATGATGCCGCGCAAGATTGCACTAGGGGGCCGCTATTCccgtgatttttttaatagatatgGTGATTTGAGGCACATCAGGCGGTTGCGTTTTTGGCCCTTGAACAAAGTCCTGATAGAGAAATATGATTTCAATGAAAGAGATGCAAATGATATGGCTGAGTTCTTGGTTCCTATCCTTGACTTTGTTCCTGAGAAACGGCCTACAGCTTCTCAGAGCCTTCTTCATCCATGGATCAATGCAGGTCCACGCCTTCTGGAGCCATCTTTGCCTTCTAATCAAAACCCAGCTGTGGAAAGTGGCGTTTctgatcaaaataaaagagataaggATGAAAGGGAGGCCATGGAGGCTGGAATGGGAAATATTGCCATAAATTCAGATTCTAAACCACTCGCAAATTCTCCGTCAATTTCTAAACCACTCACGAATTCTCCGTCGATTAAGAAGTCCTTGCAAGGCAGCCATAAATA 1673 0.4088 MGDKHEKDQTESSDYTSDDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDILHSRYVAMKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGMPIHMVKELCFHILVGLDYLHRQLSIIHTDLKPENVLLLSAIDPSKDPRKSGAPLILPNSKDKTILESGVVKDVKTSNGDLIRNHKKNIRRKAKQAAQGCAEKEASEEGEGDPEPFGAVDSSLNAMSNTDSVKEQASSSAGANRLSDADGTKGVKKRGNRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSSENFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLIEKYDFNERDANDMAEFLVPILDFVPEKRPTASQSLLHPWINAGPRLLEPSLPSNQNPAVESGVSDQNKRDKDEREAMEAGMGNIAINSDSKPLANSPSISKPLTNSPSIKKSLQGSHK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02062 557 MobiDBLite consensus disorder prediction 266 290 - -
Bva13g02062 557 MobiDBLite consensus disorder prediction 503 517 - -
Bva13g02062 557 MobiDBLite consensus disorder prediction 527 557 - -
Bva13g02062 557 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 541 - -
Bva13g02062 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bva13g02062 557 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Bva13g02062 557 MobiDBLite consensus disorder prediction 227 305 - -
Bva13g02062 557 SMART serkin_6 44 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02062 557 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Bva13g02062 557 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02062 557 Pfam Protein kinase domain 312 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02062 557 PANTHER SERINE KINASE-LIKE PROTEIN 11 541 - -
Bva13g02062 557 MobiDBLite consensus disorder prediction 486 557 - -
Bva13g02062 557 MobiDBLite consensus disorder prediction 1 23 - -
Bva13g02062 557 MobiDBLite consensus disorder prediction 487 502 - -
Bva13g02062 557 Gene3D Transferase(Phosphotransferase) domain 1 127 480 - -
Bva13g02062 557 CDD STKc_SRPK 33 479 - -
Bva13g02062 557 ProSiteProfiles Protein kinase domain profile. 44 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02062 557 SUPERFAMILY Protein kinase-like (PK-like) 39 492 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02062 Bva-Chr13 16375183 16379374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02062 10 530 EF-hand Containing Proteins AT5G22840 70.000 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bva13g02062 Pkinase 3.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02062 K08832 - gmx:100810777 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02062 13 16375183 16379374 Bva13g02062 13 16375183 16379374 ECH