Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02043 ATGGACGCCATAGAAGGCCCATCTGCTCAATACTCCTCTTACCTTCAACCATTCATGATCGCCGTCGCTGGCATAATCGGCGCTTCTCTAGCAATAGTCATATACCATATCCTTCTCCAGCGATTTTGCTTTAGTCGACAGCCAATGCTAAACAGAGCCGATACCATAAATTCACAAGACATACCCATTTCCAGATCCCCATTCAAAAACGGGGTAGACCAGGAAATCCTCGACAAGATCCCAATTCTTTCTTACTCAACCAAAAAACCTGAGATTTTCCGTTTGCACCGAAGTGAATGCGCCATTTGCTTAGGCGAATTGCAAGATGGGGAGCTTGTGCGATTGTTGCCTCCTTGTAAACATGCCTTTCATATTTCCTGTATTGATGGGTGGTTCACGGCGCATTCGGACTGTCCGATATGCCGTTCGCCCATAACTTGTGAGTCGATAGAGGCATCGGCTCCCGAAATCAATGGCCCCGAGAGGCCCTCGCAAGCGCCTTGTCTTCAAATTGATCATCAATTTCTTCGTGATTTGAGTGCTTCGACTTCGAGGTTTCAATCGGAAGGTGGCTTTCTGCGTCATTCTGTCTCTATCACGTCTCAGATGGAGAAACGGCCGCGAGCTCTGGTGATGGGGTTAAAGAGGTCATTGTCTATGGACCAGTCCTACATTTCCATTACCATACAGAAGGGAGAGCAGGAAAAGGGTTCCAGTTCTTCTGGTAAAGGGGTTGGTATCAAATACTTCAGAGCAAGATCACCAAGGGACTTTGATTACACGTCTTGTGTGCTTGCAAGATCTTTCTCGCCATTACAGAGTAATAGAAGTGCCACATCATCAAACCGAATTCTTCTTCAAGTTTG 866 0.4654 MDAIEGPSAQYSSYLQPFMIAVAGIIGASLAIVIYHILLQRFCFSRQPMLNRADTINSQDIPISRSPFKNGVDQEILDKIPILSYSTKKPEIFRLHRSECAICLGELQDGELVRLLPPCKHAFHISCIDGWFTAHSDCPICRSPITCESIEASAPEINGPERPSQAPCLQIDHQFLRDLSASTSRFQSEGGFLRHSVSITSQMEKRPRALVMGLKRSLSMDQSYISITIQKGEQEKGSSSSGKGVGIKYFRARSPRDFDYTSCVLARSFSPLQSNRSATSSNRILLQV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02043 288 CDD RING-H2_EL5_like 99 142 - -
Bva13g02043 288 SUPERFAMILY RING/U-box 99 147 - -
Bva13g02043 288 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Bva13g02043 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 147 IPR013083 -
Bva13g02043 288 Pfam Ring finger domain 99 142 IPR001841 -
Bva13g02043 288 SMART ring_2 100 141 IPR001841 -
Bva13g02043 288 PANTHER RING-H2 FINGER PROTEIN ATL73-LIKE 10 276 - -
Bva13g02043 288 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 276 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02043 Bva-Chr13 16270033 16271460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02043 20 146 C3H Transcription Factor Family AT5G17600 33.333 3.61e-21 90.1