Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02041 ATGGAGGAGAAAGCAGCCACTGAAGCTCGAAACCATGCCAGGCTGGCCATCATGGAACTGGCAAACATGATCAGCGTTCCCATGTCCCTTAACGCAATCGTACGCCTCAACGTCCCTGACGCTATCTGGCAAGGTGGCTCCAACACTCCTCTCTCCGCCTCCGAGATCCTCGCGCGTGTCCTCCCAACCGGCGGCGACGCCGAGAATCTCCAACGCATCCTTCGCATGCTCACCAGTTACGGCGTCTTTGCCGAGCACCTCTGCTCTGACGGCTCCGGTGATCGGAAATATTCCCTCACCGTCGTCGGCCAAACTCTCGTCACCGACAACGATGGTCTATCGTACGCACCTTACGTGCTCCAGCATCACCAGGAAGCGCTGATGCGAGCATGGTCATTGGTGCACGAGGCGGTGGTGGACCCGACGACGGAGCCATTCGTGAAAGCGAACGGTGAGGCAGCGTACGGGTACTATTTGAAGCAGCCGGAGATGAACGGTTTGATGTTGAAGGCAATGTCCGGGGTATCCGTACCGTTCATGAAGGCGATGCTGGATGGGTACAATGGGTTTGAAGGGGTTCAGAGATTGGTGGACGTGGGCGGGAGTGCAGGGGATTGCTTGAGAATGATATTACAGAAATACCCCTCCGTGCGAGAGGGGATAAACTTTGATCTTCCCGAGGTAGTGGCCAAAGCACCAGAGATTCCTGGGGTCATTCACGTCGGTGGGGACATGTTCAAATTTATTCCACAAGGTGATGCTATCTTCATGAAGTGGATACTAACAACATGGACAGACGAGGAATGCCAGAAGATAATGGAGAACTGTTATAAGGCACTGCCTGCGCGAGGAAAACTGATTGCTTGTGAGCCAGTGCTGCCGGAACAGTCCGATGAGAGTCACAGAACTCGTGCTTTGCTAGAGGGAGACATATTTGTGATGACAATCTACAGAGCCAAGGGTAAGCACAGGACTGAAGAACAGTTTAGACGTATTGGCCTCTCTGCTGGTTTCCCTCACTTCCGTGCCTTCCCCGTTGATCACTTTTATACCCTTCTTGAATTCCTAAAATG 1073 0.5322 MEEKAATEARNHARLAIMELANMISVPMSLNAIVRLNVPDAIWQGGSNTPLSASEILARVLPTGGDAENLQRILRMLTSYGVFAEHLCSDGSGDRKYSLTVVGQTLVTDNDGLSYAPYVLQHHQEALMRAWSLVHEAVVDPTTEPFVKANGEAAYGYYLKQPEMNGLMLKAMSGVSVPFMKAMLDGYNGFEGVQRLVDVGGSAGDCLRMILQKYPSVREGINFDLPEVVAKAPEIPGVIHVGGDMFKFIPQGDAIFMKWILTTWTDEECQKIMENCYKALPARGKLIACEPVLPEQSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRRIGLSAGFPHFRAFPVDHFYTLLEFLK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02041 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 357 IPR016461 GO:0008168
Bva13g02041 357 Pfam Dimerisation domain 28 78 IPR012967 GO:0046983
Bva13g02041 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Bva13g02041 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 355 IPR029063 -
Bva13g02041 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Bva13g02041 357 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Bva13g02041 357 Gene3D - 2 111 IPR036388 -
Bva13g02041 357 PANTHER OS02G0823400 PROTEIN 3 355 - -
Bva13g02041 357 Gene3D Vaccinia Virus protein VP39 112 357 IPR029063 -
Bva13g02041 357 PANTHER O-METHYLTRANSFERASE 3 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02041 Bva-Chr13 16257731 16260474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02041 3 357 Monolignol Biosynthesis Gene Families AT3G53140 76.944 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02041 - - minc:123201366 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02041 13 16257731 16260474 Bva13g02041 13 16257731 16260474 ECH