Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02038 ATGGCTGAATTTGAAGAACCCGTGAAGCAAGAGTTGAATTCAACAATTGCTTCTGAGGTTCAGTCTCATAATCAATGCGATTCACTCGTCCCAATTCGTGCCTCGGAAACTGAGGTTGCCTCCGAGTCCCAGGCGATTCCTTCTGTGCAGGCTTCTGAGAGTACCAGCGACAGGGTACGTAAATGTTCTGTGGTGAATGGTTACATTGTTTATACTCGAGAAAAGAAGTCTCGTCCTTCGTCTCATGCGTTTTCTGAAAATGGGAAAGTTAAGAGACTCAAGGCCTCTGTTTCTCAAGAACGGGAGACAAATACTGATATTCCAGTTTCAAATGGTGGAGGTGGTGTAGAGATAGAtaacttggaaaaaaaattggaaatcgAAGTTGGAAGCAATGAAGAAAACGTTAATTGTAGTTACCTAAAGAGCGAACCTATACAGTCTCTGGCCGAGGAAGTTGGCTGCAAGGAGGTTACTATAGCGAATTCTAACAACTATGAGGAACAGAAAGATCTTGTAGATAAGACATTGAGGCGGTATACGCGATCAAAATTGAAACGAAACGTTGGCTCAAGTGATAAAACGGGGACAGTGTTAGAAGCTGTTGAGACAGCAAATGCCGCTGTCAATGCATTAACAAGTCCAAGAAACAAGCTTGAATTGAAGATGTCGAAGAAGATTGTAATCAACAAGAAACCTATGAACGTCAAGGAACTCTTTGACACTGGCTTACTTGATGGGGTTACAGTAGTTTACGAGGGTGGCAAGAAGGCTTCTGGTCTGCGGGGTGTTATTCAAGATGGGGGAATATTGTGTTCTTGCTGTCTGTGCAATGGACGCTATGTTATTCCAATTTCTCAATTTGAGATTCATGCTTGCAAAGTATATAGGCGAGCAGCACAGTATATTTGCTTCGAAAATGGGAAGAGCCTTCTCGAGGTAATGAGAGCATGCAGGGGAGGGCCCCTACATGCGGTGGAGGCCACAATTCAAAATATGCTAAGTGCTCCGCctgaagaaaaatactttactTGTAGAAAATGCAAAGGATGTTTCCCCGCTTCATGTGTGGGAAGAGTAGGGCCCATATGCAATTCTTGCATAGAAACTAAGAAATCTGAAGACAGTTCTATAGATGCAGTTGGCGAAACAGTTGGCAAAAGAGTCAGGTCCCCTCGACCTGTGCCGTTCTCCAAGCCTTCTAGTAGTCCTGAGCCGTGTATCTCTTCAAAAAAGAGttattggaagaaaaaaacaaaGTCACCAAAACGGCTTAGCAGTTCAAAGTCTTATAAGAGAGCTTCAGTGCCTACCCTATCACAAAAGAAGAGTCTCTGGAGTACAAAAAAGAAGTCACCAAAGGTGTCAGTAAAATTGAAGACACCGAAAATTActtcaaattcaaagtttTTATCTTCAGAAAATAAGACTCAATGGAAGATCACTAAAAAGGACCAGCGGTTGCATAAGTTAGTTTTTGAGGAAGGTGGATTACCTGATGGAACTGAAGTAGCTTATTATGCGTGTGGACAGAAACTGCTTGAGGGTTACAAAAAGGGCTCTGGAATATTTTGTCGATGCTGCAACTCTGAGGTTAGCCCCTCACAGTTTGAAGTCCATGCAGGCTGGTCTTCTCGTAGGAAACCTTATGCATACATCTACACATCAAATGGGGTGTCTCTCCATGAGTTGGCAATATCTCTGTCTAAAGGTCGGAAATACTCTGCAAAGGATAATGATGATTTGTGCATCATTTGCTGGGATGGTGGAAATCTTTTGCTCTGTGATGGCTGCCCAAGGGCATTCCATAAAGAATGTGCATCTCTGTCGAGTATTCCACATGGTGACTGGTACTGTAAATTTTGCCAAAACATGTTCCAGAGAGAAAAGTTTGTGGCACATAATGCAAATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCGATTGAAGAAATAACCCAGAGATGTATTCGCATTGTCAGAGACATGGAAGCTGAGCTCAGTGGTTGTGCTTTGTGCTgGGCTTATGACTTCAGCAAATCAGGATTTGGTCCGCGCACAATAATACTCTGCGATCAGtGCGAAAAGGAATATCATGTTGGCTGTTTGAGGGATCACAAAATGGCATACTTGAAGGAGTTGCCAGAAGGGAATTGGTTTTGTTGTCCGGATTGCACGAGAATACACTCTACTTTGCAAAACCTTCTGGTTAGGGGGGCTGAGAAACTCCCTGACTCTCTCCTCGATGTTTTAAAGAAGAAGCAGGCGGAAAAAGGTTTAGAATCCATGAATGATATTGATGTGAGATGGAGAGTTCTTAATGGCAAAATTGCTTCTCCAGAAACTAGGCCGTTACTTTCAGCGGCTGTCTCAATCTTTCATGAATGCTTTGATCCCATTGTTGATGTAACCAGTGGACGTGACCTTATTCCAGCCATGGTTTACggAAGGAATGTGAGGGGTCAAGAGTTTGGAGGAATGTATTGTGCAATCTTAATGGTCAATTCATGTGTAGTATCTGCTGGAATGTTTCGAATTTTTGGCAAGGATGTTGCAGAACTCCCATTAGTTGCAACGAGTAACGGTAACCATGGAAAGGGCTATttccaaatattatttaactgCATTGAGAGACTGCTAGCTTTCTTGAACGTGAAGAACCTTGTGCTACCGGCCGCTGAAAAAGCTGAATCCATATGGACAGATAAATTCGGGTTCAACAAGATAGAACCCGAGCAGCTTGTTGACTACAGAAAGAACTGCCATCAGATGGTGACATTCAAAGGGACATCCATGCTTGAGAAAATGGTGCCTCCATGTCGAGTAATTAAACCCGTTAAAGAGGAAAACCCcta 2858 0.4192 MAEFEEPVKQELNSTIASEVQSHNQCDSLVPIRASETEVASESQAIPSVQASESTSDRVRKCSVVNGYIVYTREKKSRPSSHAFSENGKVKRLKASVSQERETNTDIPVSNGGGGVEIDNLEKKLEIEVGSNEENVNCSYLKSEPIQSLAEEVGCKEVTIANSNNYEEQKDLVDKTLRRYTRSKLKRNVGSSDKTGTVLEAVETANAAVNALTSPRNKLELKMSKKIVINKKPMNVKELFDTGLLDGVTVVYEGGKKASGLRGVIQDGGILCSCCLCNGRYVIPISQFEIHACKVYRRAAQYICFENGKSLLEVMRACRGGPLHAVEATIQNMLSAPPEEKYFTCRKCKGCFPASCVGRVGPICNSCIETKKSEDSSIDAVGETVGKRVRSPRPVPFSKPSSSPEPCISSKKSYWKKKTKSPKRLSSSKSYKRASVPTLSQKKSLWSTKKKSPKVSVKLKTPKITSNSKFLSSENKTQWKITKKDQRLHKLVFEEGGLPDGTEVAYYACGQKLLEGYKKGSGIFCRCCNSEVSPSQFEVHAGWSSRRKPYAYIYTSNGVSLHELAISLSKGRKYSAKDNDDLCIICWDGGNLLLCDGCPRAFHKECASLSSIPHGDWYCKFCQNMFQREKFVAHNANAVAAGRVEGVDPIEEITQRCIRIVRDMEAELSGCALCWAYDFSKSGFGPRTIILCDQCEKEYHVGCLRDHKMAYLKELPEGNWFCCPDCTRIHSTLQNLLVRGAEKLPDSLLDVLKKKQAEKGLESMNDIDVRWRVLNGKIASPETRPLLSAAVSIFHECFDPIVDVTSGRDLIPAMVYGRNVRGQEFGGMYCAILMVNSCVVSAGMFRIFGKDVAELPLVATSNGNHGKGYFQILFNCIERLLAFLNVKNLVLPAAEKAESIWTDKFGFNKIEPEQLVDYRKNCHQMVTFKGTSMLEKMVPPCRVIKPVKEENP 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02038 952 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 668 729 IPR013083 -
Bva13g02038 952 MobiDBLite consensus disorder prediction 378 436 - -
Bva13g02038 952 ProSiteProfiles Zinc finger PHD-type profile. 580 625 IPR019787 -
Bva13g02038 952 MobiDBLite consensus disorder prediction 1 20 - -
Bva13g02038 952 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 43 944 - -
Bva13g02038 952 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 826 913 IPR016181 -
Bva13g02038 952 ProSitePatterns Zinc finger PHD-type signature. 583 622 IPR019786 -
Bva13g02038 952 SUPERFAMILY FYVE/PHD zinc finger 570 624 IPR011011 -
Bva13g02038 952 Pfam PHD-finger 583 624 IPR019787 -
Bva13g02038 952 SMART PHD_3 582 623 IPR001965 -
Bva13g02038 952 SMART PHD_3 670 727 IPR001965 -
Bva13g02038 952 MobiDBLite consensus disorder prediction 77 99 - -
Bva13g02038 952 Pfam Tify domain binding domain 516 566 IPR032308 -
Bva13g02038 952 Pfam Tify domain binding domain 263 318 IPR032308 -
Bva13g02038 952 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 569 657 IPR013083 -
Bva13g02038 952 MobiDBLite consensus disorder prediction 413 427 - -
Bva13g02038 952 SUPERFAMILY FYVE/PHD zinc finger 664 731 IPR011011 -
Bva13g02038 952 PANTHER AUTOIMMUNE REGULATOR 43 944 - -
Bva13g02038 952 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02038 Bva-Chr13 16235840 16243551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02038 225 949 PHD Transcription Factor Family AT2G36720 55.435 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02038 - - gmx:100802562 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02508 04 22698771 22706340 Bva13g02038 13 16235840 16243551 BWGD