Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02037 ATGAGAATCAGCAGAACCCTCTTTTGTCTCTCTGTCTTTATtgcttttctcctttctatcATCATTGCTCATTATATCTTCCTTCCTGGCTTCACCACTAAGACTGCCATTGGTCCCAAAACTTGCTTCAACCAGCTTGGCTTACTAAGTAGAATTATCAAGCTTAGTGGGGCAGAAGATTTCGTGTCTCTGATATCCACTATTGCATCGCATCACCACCGGCGTTGGAAGCATAACCAGAAATGTGACCCAACCCAATGGGATTCTAATCTCATTTCAGAATACAATGTGACTCTCGTTTTCACGGTTGGCCAAAATGGTTGTGCTAATTTTACTAGTGTGCAAAAAGCTGTTGATGCAGTGCCTGAATCTAACCCATACAGGACTCTTATCATTGTTGATTCTGGTACTTACAGGGAAAAGGTAGCGGTGCAGGAAAACAAAGCAAAGTTAATATTGCAAGGTCAAGGGTATCTTAACACAATTATAGAATGGAATGATACTGCCAATTCCACTGGAGGGACTTCCTATAGCTACTCGGTTGGCATATTTGCTTCTAATTTCACTGCTTACAACATAAGCTTTAAgAATTCGGCTCCTCCACCATTCCCCGGTGAGGTTGGAGCACAAGCAATAGCATTGAGAGTTACTGGTGATCAAGTTGCATTTTACAAATGTGGGTTCTATGGTGCTCAGGACACAGTAAATGATGACAATGGAAGACATTATTATAAAGAATGTTTTATCCAAGGTTCCATTGACTTCATATTCGGAAATGCTAGATCGCTTTACGAGGATTGCACCATCAATTGTATAGCAAAAGACGTGGGGGTTGGGGTTGGGGTTAGCGGGTCCATTACAGCTCATGGACGGCAGTCAAGGAAGGAGGAAACTGGGTTTTCGTTCTTGAATTGCAGCATTGGGGGAAGTGGGAAAGTTTGGCTTGGAAGACCATGGGAACCATATGCCGTTGTTGTCTTCTCAACGACATATATGTCTGATGTCGTAGCCTCAGAGGGATGGAACGATTGGAGAGACCCGACCAGAGACCAAACTGTCTTCTTTGGGGAGTATCGTTGTTTTGGACCAGGAGCGAATTACACGTCTAGAGTCTCGTACGGGAAGCAACTCAGTAATAATGAAGCGGCACCTTACATGGATATTTCCTACATTAATGGACAAGATTGGATTCCTCATCATCAAAAATA 1208 0.423 MRISRTLFCLSVFIAFLLSIIIAHYIFLPGFTTKTAIGPKTCFNQLGLLSRIIKLSGAEDFVSLISTIASHHHRRWKHNQKCDPTQWDSNLISEYNVTLVFTVGQNGCANFTSVQKAVDAVPESNPYRTLIIVDSGTYREKVAVQENKAKLILQGQGYLNTIIEWNDTANSTGGTSYSYSVGIFASNFTAYNISFKNSAPPPFPGEVGAQAIALRVTGDQVAFYKCGFYGAQDTVNDDNGRHYYKECFIQGSIDFIFGNARSLYEDCTINCIAKDVGVGVGVSGSITAHGRQSRKEETGFSFLNCSIGGSGKVWLGRPWEPYAVVVFSTTYMSDVVASEGWNDWRDPTRDQTVFFGEYRCFGPGANYTSRVSYGKQLSNNEAAPYMDISYINGQDWIPHHQK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02037 402 Pfam Pectinesterase 102 393 IPR000070 GO:0030599|GO:0042545
Bva13g02037 402 SUPERFAMILY Pectin lyase-like 98 399 IPR011050 -
Bva13g02037 402 Gene3D - 95 402 IPR012334 -
Bva13g02037 402 PANTHER PECTINESTERASE 14-RELATED 10 400 - -
Bva13g02037 402 ProSitePatterns Pectinesterase signature 2. 249 258 IPR033131 -
Bva13g02037 402 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02037 Bva-Chr13 16232472 16234468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02037 94 397 Carbohydrate Esterase AT1G05310 53.115 7.99e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02037 - - gmx:100802034 568.926