Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02017 ATGCCGATCCGTAATATTGCCATCGGTAGGCCCGAGGAGACCACTCGCCCAGACACCTTGAAGGCCGGGCTGGCCGAGTTCATCTCCACCCTTATCTTCGTCTTCGCCGGCTCCGGATCCGGTATGGCCTTCAACAAACTCACCAACGACGGTGCCACCACTCCTTCCGGCCTCATCGCTGCCTCGATTGCCCATGCATTCGCTCTTTTCGTCGCGGTTTCCGTCGGTGCCAACATCTCAGGCGGCCACGTCAACCCTGCCGTCACCTTCGGTGCCTTCGTCGGCGGTAACATCTCCCTCTTACGCGGCATCGTCTACTGGATCGCTCAGCTCCTCGGTTCCACCGTTGCCTGCTTGCTCCTTAGGTTCGTCACCGGAGGCCTGAGCGTCCCAGCATTCTCCGTTTCCTCTGGAGTTGGAGTATGGAACGCCGTCGTATTTGAGATCGTGATGACTTTTGGATTAGTGTACACAGTGTACGCCACAGCCATTGATCCCAAGAGGGGCAGTCTGGGAACTATCGCCCCGATCGCAATTGGTTTCATTGTGGGAGCCAATATTTTGGCGGGTGGGGCCTTCGACGGAGCATCCATGAACCCGGCCGTGTCGTTTGGACCTGCTTTGGTGAGCTGGAGCTGGACTCACCAGTGGGTCTACTGGGTTGGGCCTCTGATCGGTGGTGGGCTCGCCGGCATTGTTTACGAACTGTTCTTTATCAGCCACTCCCACGAGCAGCTCCCCACCGCCGACTACTA 755 0.5828 MPIRNIAIGRPEETTRPDTLKAGLAEFISTLIFVFAGSGSGMAFNKLTNDGATTPSGLIAASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLRGIVYWIAQLLGSTVACLLLRFVTGGLSVPAFSVSSGVGVWNAVVFEIVMTFGLVYTVYATAIDPKRGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWTHQWVYWVGPLIGGGLAGIVYELFFISHSHEQLPTADY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02017 251 PANTHER AQUAPORIN-8 1 251 IPR034294 -
Bva13g02017 251 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 TIGRFAM MIP: MIP family channel proteins 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 Pfam Major intrinsic protein 15 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02017 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Bva13g02017 251 PANTHER AQUAPORIN TIP1-1 1 251 - -
Bva13g02017 251 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
Bva13g02017 251 SUPERFAMILY Aquaporin-like 13 247 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02017 Bva-Chr13 16120761 16122818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02017 1 251 Major Intrinsic Protein MIP AT2G36830 83.665 2.06e-154 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02017 K09873 - zju:107431962 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02525 04 22789273 22790503 Bva13g02017 13 16120761 16122818 BWGD
Bva13g02017 13 16120761 16122818 Bva13g02017 13 16120761 16122818 ECH