Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02008 ATGGTGGCGGCGGAGTTGAGTGACGGTGGCCggaaacaaatgaaaagccTGGGCTTCCATGTTCTCACCGGTCGCTGGTTCACGGTCTTTGCCTCTTTACTGATCATGGCGGTTGCCGGAGCAACCTACATGTTTGGTTTATACTCAAACGACGTAAAAACGTCACTAGGCTACGACCAGACCACACTCAATTTGCTCAGCTTCTTCAAAGACTTGGGGGGCAACGTGGGAGTCTTATCTGGGTTAATCAATGAAATCACCCCACCCTTGGTGGTTCTTTCAATTGGGGCCGCTATGAACTTCTTCGGCTACTTCATGATATGGCTTGCTGTCACCGGCCGCATTGACAAACCCCAAATCTGGCAAATGTGTCTCTACATTTGCATTGGAGCAAATTCACAGTCTTTTGCCAACACAGGTGCCTTGGTGACCTGTGTCAAGAATTTCCCAGGAAGCAGGGGTAGTGTTTTGGGCTTGCTTAAGGGTTATGTCGGCTTAAGTGGAGCCATTATAACACAGCTCTACCATGCCTTCTATGGAGATCACAACTCCAAAGCTCTTATCTTGCTCATTGCTTGGCTTCCCACTGCTgtcttatttctctttctcccaACAATTAGGACACTAAACACCGTACGACAACCCAAGGAGCTCAAGGTTTTCTGTAATCTTCTATATATTTCACTTGGCCTAGCTGGCTTTCTCATGGCACTCATCATCGTACAAAACAAGCTCAGCTTTTCGAGGATTGAGTACGTTGTCGACGGAGCCGTGGTTCTCTTGTTACTTTTTCTTCCACTTGCAGTGGTTTTCAGAGAGGAATTTTACATCTGGAAGTCCAAGATGCAAGCTTTATCTGATTCTTCCCAATTGAAAGAAGTGACCAGTGTGGTTCCACCTTCCACAAGCTCTGTGGAACTACCACAGGCAACGCCAGCTTCCACAAGTTTGCAGGAGGAAACTAGTTGTCTGAGAAACATTTTTAAACCACCAAACAGGGGCGAGGATTACACTATTTTGCAAGCTCTGTTCAGCATTGACATGTTGATTCTGTTCGCGGCAACAACTTTTGGTGTTGGTGGAACATTAACGGCTATTGACAATTTGGGACAGATTGGGAACTCACTGGGGTACCCAAGTAAGAGCACAACAACGTTTGTGTCCTTGGTGAGCATATGGAACTATCTGGGACGAGTGGTGGCTGGTTTTGCTTCTGAATTcttcttaaccaagttcaaaTTCCCTCGACCCTTGATGCTGACTCTTGTCATGCTTTTCTCTTGCGTTGGACATCTTCTGATTGCTTTTGGGGTGCCaaattctctctattttacTTCGGTGATTATTGGGTTTTGCTTTGGAGCACAATGGCCCTTAATGTTTGCAATCATATCTGAGATATTTGGCCTCAAAACTACTCCACTTTGTACAATTTTGGAGCCGTGGCGAGCCCAGTTGGATCTTACGTACTCAACGTG 1478 0.4425 MVAAELSDGGRKQMKSLGFHVLTGRWFTVFASLLIMAVAGATYMFGLYSNDVKTSLGYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPLVVLSIGAAMNFFGYFMIWLAVTGRIDKPQIWQMCLYICIGANSQSFANTGALVTCVKNFPGSRGSVLGLLKGYVGLSGAIITQLYHAFYGDHNSKALILLIAWLPTAVLFLFLPTIRTLNTVRQPKELKVFCNLLYISLGLAGFLMALIIVQNKLSFSRIEYVVDGAVVLLLLFLPLAVVFREEFYIWKSKMQALSDSSQLKEVTSVVPPSTSSVELPQATPASTSLQEETSCLRNIFKPPNRGEDYTILQALFSIDMLILFAATTFGVGGTLTAIDNLGQIGNSLGYPSKSTTTFVSLVSIWNYLGRVVAGFASEFFLTKFKFPRPLMLTLVMLFSCVGHLLIAFGVPNSLYFTSVIIGFCFGAQWPLMFAIISEIFGLKTTPLCTILEPWRAQLDLTYST 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02008 492 PANTHER MFS TRANSPORTER 9 472 - -
Bva13g02008 492 Pfam Nodulin-like 25 271 IPR010658 -
Bva13g02008 492 Gene3D MFS general substrate transporter like domains 217 479 IPR036259 -
Bva13g02008 492 SUPERFAMILY MFS general substrate transporter 26 471 IPR036259 -
Bva13g02008 492 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02008 Bva-Chr13 16082667 16085989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02008 1 471 Nodulin-like Gene Family AT2G39210 68.067 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02008 - - gmx:100797779 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00166 04 1038182 1040601 Bva13g02008 13 16082667 16085989 BWGD
Bva13g02008 13 16082667 16085989 Bva09g00297 09 1548263 1549966 ECH
Bva13g02008 13 16082667 16085989 Bva13g02008 13 16082667 16085989 ECH